RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ZNF136P52737 540 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 RGS8P57771 180 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-203ENST00000371319 HOXC5Q00444 222 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 CT45A2Q5DJT8 189 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 PLA2G2CQ5R387 149 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 RBM48Q5RL73 367 aaKnown RBP16.25■□□□□ 0.19
SSBP3-203ENST00000371319 C6orf141Q5SZD1 244 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 PHF19Q5T6S3 580 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 RNF220Q5VTB9 566 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 PWWP2BQ6NUJ5 590 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 Q6ZPB1 254 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-203ENST00000371319 LAPTM4BQ86VI4 370 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 SETD9Q8NE22 299 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 DIO2Q92813 273 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 GTPBP3Q969Y2 492 aaKnown RBP16.25■□□□□ 0.19
SSBP3-203ENST00000371319 FKBP10Q96AY3 582 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 SENP5Q96HI0 755 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-203ENST00000371319 HRASLS5Q96KN8 279 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 ITPAQ9BY32 194 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 TGIF2Q9GZN2 237 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 VN1R1Q9GZP7 353 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 ZNF556Q9HAH1 456 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 CTPS2Q9NRF8 586 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 SEMA4GQ9NTN9 838 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 OCIAD1Q9NX40 245 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 TUBA8Q9NY65 449 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-203ENST00000371319 CTSFQ9UBX1 484 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 PRODH2Q9UF12 536 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 NTNG1Q9Y2I2 539 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 PCDHGB2Q9Y5G2 931 aa16.25■□□□□ 0.19
SSBP3-203ENST00000371319 COL27A1Q8IZC6 1860 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-203ENST00000371319 TTC36A6NLP5 189 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 SCRG1O75711 98 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 DDAH2O95865 285 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 ADAP00813 363 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 POU2F1P14859 743 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 RORAP35398 523 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 TAS2R41P59536 307 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 TUBA4AP68366 448 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 CDK5R2Q13319 367 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 PGBD2Q6P3X8 592 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 KLHL17Q6TDP4 642 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 PARP8Q8N3A8 854 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 MORN4Q8NDC4 146 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 C7orf57Q8NEG2 295 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 MCHR1Q99705 422 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 Q9N2J8 555 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 MGAT4BQ9UQ53 548 aa16.24■□□□□ 0.19
SSBP3-203ENST00000371319 IGLV3-12A0A075B6K2 115 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 A0A087WXM4 84 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 CPSF4LA6NMK7 179 aaKnown RBP16.23■□□□□ 0.19
SSBP3-203ENST00000371319 BCAS1O75363 584 aaPredicted RBP16.23■□□□□ 0.19
SSBP3-203ENST00000371319 LDOC1O95751 146 aaPredicted RBP16.23■□□□□ 0.19
SSBP3-203ENST00000371319 CCNYL3P0C7X3 344 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 AGXTP21549 392 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 GGT2P36268 569 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 GRK6P43250 576 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 HLCSP50747 726 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 SLC37A1P57057 533 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 IL5RAQ01344 420 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 PLAURQ03405 335 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 ZFP36L1Q07352 338 aaKnown RBP16.23■□□□□ 0.19
SSBP3-203ENST00000371319 ELAVL1Q15717 326 aaKnown RBP16.23■□□□□ 0.19
SSBP3-203ENST00000371319 FLYWCH1Q4VC44 716 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 ENTPD8Q5MY95 495 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 MRPL2Q5T653 305 aaKnown RBP16.23■□□□□ 0.19
SSBP3-203ENST00000371319 ZNF385CQ66K41 422 aaPredicted RBP16.23■□□□□ 0.19
SSBP3-203ENST00000371319 B3GNT8Q7Z7M8 397 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 PRSS58Q8IYP2 241 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 PLPP5Q8NEB5 264 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 CNIH3Q8TBE1 160 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 SLC2A12Q8TD20 617 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 ZNF721Q8TF20 911 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 APOL4Q9BPW4 351 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 DGCR6LQ9BY27 220 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 SLC7A5P2Q9GIP4 190 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 APMAPQ9HDC9 416 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 REV1Q9UBZ9 1251 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 PCDHGA6Q9Y5G7 932 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 R4GN57 208 aa16.23■□□□□ 0.19
SSBP3-203ENST00000371319 CDHR4A6H8M9 788 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 NPIPB9F8W1W9 429 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 AP3D1O14617 1153 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 OR10H3O60404 316 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 ONECUT2O95948 504 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 THY1P04216 161 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 IGKV3-11P04433 115 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 CRHBPP24387 322 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 ACP1P24666 158 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 RNF144AP50876 292 aaPredicted RBP16.22■□□□□ 0.19
SSBP3-203ENST00000371319 NR1H2P55055 460 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 NUP107P57740 925 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 TRA2AQ13595 282 aaKnown RBP eCLIP16.22■□□□□ 0.19
SSBP3-203ENST00000371319 LAIR1Q6GTX8 287 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 PLEKHM3Q6ZWE6 761 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 SATL1Q86VE3 508 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 BCORP1Q8N888 145 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 ATOH1Q92858 354 aaPredicted RBP16.22■□□□□ 0.19
SSBP3-203ENST00000371319 UCK2Q9BZX2 261 aa16.22■□□□□ 0.19
SSBP3-203ENST00000371319 FTSJ1Q9UET6 329 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms