RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 FAPQ12884 760 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 ELOAQ14241 798 aaKnown RBP15.04■□□□□ -0
COL17A1-202ENST00000369733 PIP5KL1Q5T9C9 394 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 ARSKQ6UWY0 536 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 NAXEQ8NCW5 288 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 ELP5Q8TE02 316 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 FAM46BQ96A09 425 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 DUS3LQ96G46 650 aaKnown RBP15.04■□□□□ -0
COL17A1-202ENST00000369733 ZNF419Q96HQ0 510 aaPredicted RBP15.04■□□□□ -0
COL17A1-202ENST00000369733 SLC6A16Q9GZN6 736 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 A3GALT2U3KPV4 340 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 TRBV4-1A0A0J9YWV2 114 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 CACNG3O60359 315 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 CCR7P32248 378 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 TLE2Q04725 743 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 ZNF616Q08AN1 781 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 LRFN4Q6PJG9 635 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 PAQR9Q6ZVX9 377 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 MCEMP1Q8IX19 187 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 SLC25A18Q9H1K4 315 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 PELI2Q9HAT8 420 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 NOX3Q9HBY0 568 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 PTTG3PQ9NZH4 202 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 TNFP01375 233 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 AQP2P41181 271 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 RGRP47804 291 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 SLC14A2Q15849 920 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 NNATQ16517 81 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 OR4F15Q8NGB8 312 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 GIMAP1Q8WWP7 306 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 LMF1Q96S06 567 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 UHRF1Q96T88 793 aaPredicted RBP15.04■□□□□ -0
COL17A1-202ENST00000369733 ZNF701Q9NV72 531 aaPredicted RBP15.04■□□□□ -0
COL17A1-202ENST00000369733 TXNL4BQ9NX01 149 aaKnown RBP15.04■□□□□ -0
COL17A1-202ENST00000369733 MSRAQ9UJ68 235 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 FABP7O15540 132 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 AMY2BP19961 511 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 GABRA5P31644 462 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 DLSTP36957 453 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 PBX2P40425 430 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 HBA1P69905 142 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 C3orf58Q8NDZ4 430 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 SYNPRQ8TBG9 265 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 SLC7A13Q8TCU3 470 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 DNAJA3Q96EY1 480 aa15.04■□□□□ -0
COL17A1-202ENST00000369733 FAM155AB1AL88 458 aaPredicted RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 TNFRSF10AO00220 468 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 SSX5O60225 188 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 CSF1P09603 554 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 CTU2Q2VPK5 515 aaKnown RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 ZNF776Q68DI1 518 aaPredicted RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 CLDN22Q8N7P3 220 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 BRIX1Q8TDN6 353 aaKnown RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 MED30Q96HR3 178 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 GPR78Q96P69 363 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 MBOAT4Q96T53 435 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 PRDM9Q9NQV7 894 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 BABAM2Q9NXR7 383 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 ZBTB42B2RXF5 422 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 ACRP10323 421 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 ARSBP15848 533 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 RIDAP52758 137 aaKnown RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 DEFB115Q30KQ5 88 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 PLK5Q496M5 336 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 NKAPLQ5M9Q1 402 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 TMPRSS9Q7Z410 1059 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 IFNL1Q8IU54 200 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 BOLLQ8N9W6 283 aaKnown RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 CHST14Q8NCH0 376 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 OR5M3Q8NGP4 307 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 PLCH1Q4KWH8 1693 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 A0A1W2PPL8 197 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 ARF3P61204 181 aaPredicted RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 ARF1P84077 181 aaKnown RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 MBTPS1Q14703 1052 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 SLC5A12Q1EHB4 618 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 KDM4DQ6B0I6 523 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 PHB2Q99623 299 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 AMBRA1Q9C0C7 1298 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 OR8D2Q9GZM6 311 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 MEPEQ9NQ76 525 aaPredicted RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 KCNK5O95279 499 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 ERCC1P07992 297 aaPredicted RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 TUBG1P23258 451 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 APEX1P27695 318 aaKnown RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 ESCO2Q56NI9 601 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 CCDC54Q8NEL0 328 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 KHSRPQ92945 711 aaKnown RBP eCLIP15.03■□□□□ -0
COL17A1-202ENST00000369733 C4orf36Q96KX1 117 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 NUMBLQ9Y6R0 609 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 CDC123O75794 336 aaPredicted RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 MRPS10P82664 201 aaKnown RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.03■□□□□ -0
COL17A1-202ENST00000369733 LYPD4Q6UWN0 246 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 SSX6Q7RTT6 188 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 PXKQ7Z7A4 578 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 MRPL10Q7Z7H8 261 aaKnown RBP15.03■□□□□ -0
COL17A1-202ENST00000369733 SLC35B4Q969S0 331 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 ZNF649Q9BS31 505 aa15.03■□□□□ -0
COL17A1-202ENST00000369733 SLC5A7Q9GZV3 580 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms