RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PPWD1Q96BP3 646 aaKnown RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 ZNF184Q99676 751 aaPredicted RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 MAP3K3Q99759 626 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 PKP2Q99959 881 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 NPLQ9BXD5 320 aaPredicted RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 KLHL4Q9C0H6 718 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 DCAF13Q9NV06 445 aaKnown RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 FBXW2Q9UKT8 454 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 PLA2G2DQ9UNK4 145 aa8.17□□□□□ -1.1
TPM3-213ENST00000368545 SAMD4AQ9UPU9 718 aaKnown RBP8.17□□□□□ -1.1
TPM3-213ENST00000368545 IGHV1OR21-1A0A087WYE8 117 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 RNF103-CHMP3A0A140T963 221 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 SLC9B1P1A6NJY1 282 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 EIF2S1P05198 315 aaKnown RBP8.16□□□□□ -1.1
TPM3-213ENST00000368545 RAP2AP10114 183 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 CPN2P22792 545 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 FASP25445 335 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 PCGF2P35227 344 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 MAGEA8P43361 318 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 DUSP3P51452 185 aaPredicted RBP8.16□□□□□ -1.1
TPM3-213ENST00000368545 VSX2P58304 361 aaPredicted RBP8.16□□□□□ -1.1
TPM3-213ENST00000368545 RAB32Q13637 225 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 EFR3AQ14156 821 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 SHBQ15464 509 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 CEBPEQ15744 281 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 NDUFA9Q16795 377 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 DEFB134Q4QY38 66 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 CMPK2Q5EBM0 449 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 WLSQ5T9L3 541 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 OR52E8Q6IFG1 317 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 BHLHB9Q6PI77 547 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 TMEM64Q6YI46 380 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 CD163Q86VB7 1156 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 PLXDC1Q8IUK5 500 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 SLC35F3Q8IY50 421 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 DNAJC22Q8N4W6 341 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 C11orf65Q8NCR3 313 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 SFXN5Q8TD22 340 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 DNAJC9Q8WXX5 260 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 CFHR4Q92496 578 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 MOAP1Q96BY2 351 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 NEURL3Q96EH8 262 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 CNDP2Q96KP4 475 aaKnown RBP8.16□□□□□ -1.1
TPM3-213ENST00000368545 RNF145Q96MT1 663 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 TGM7Q96PF1 710 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 BBS4Q96RK4 519 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 MAPKAP1Q9BPZ7 522 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 NUDT16L1Q9BRJ7 211 aaKnown RBP8.16□□□□□ -1.1
TPM3-213ENST00000368545 TMEM38AQ9H6F2 299 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 MAGIXQ9H6Y5 334 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 CXorf36Q9H7Y0 433 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 POLR1BQ9H9Y6 1135 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 IL21RQ9HBE5 538 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 PDE7BQ9NP56 450 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 SCN3AQ9NY46 2000 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 PLEKHB1Q9UF11 243 aaPredicted RBP8.16□□□□□ -1.1
TPM3-213ENST00000368545 RPS6KA6Q9UK32 745 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 DAPP1Q9UN19 280 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 FAF1Q9UNN5 650 aaPredicted RBP8.16□□□□□ -1.1
TPM3-213ENST00000368545 LRRC42Q9Y546 428 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 SNX8Q9Y5X2 465 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 ZNF780BQ9Y6R6 833 aa8.16□□□□□ -1.1
TPM3-213ENST00000368545 A0A1W2PPH5 198 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 MYO1GB0I1T2 1018 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 TIPRLO75663 272 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 ZBTB11O95625 1053 aaPredicted RBP8.15□□□□□ -1.1
TPM3-213ENST00000368545 GIMD1P0DJR0 217 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 ACADSP16219 412 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 CSNK2A2P19784 350 aaPredicted RBP8.15□□□□□ -1.1
TPM3-213ENST00000368545 ALDH4A1P30038 563 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 MPIP34949 423 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 CRATP43155 626 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 NCBP2P52298 156 aaKnown RBP eCLIP8.15□□□□□ -1.1
TPM3-213ENST00000368545 MVDP53602 400 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 LIM2P55344 173 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 TXNL4AP83876 142 aaKnown RBP8.15□□□□□ -1.1
TPM3-213ENST00000368545 CHRNB3Q05901 458 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 HSPB3Q12988 150 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 TCTE1Q5JU00 501 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.15□□□□□ -1.1
TPM3-213ENST00000368545 GCNT6Q5T4J0 391 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 GARNL3Q5VVW2 1013 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 SAXO2Q658L1 398 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 FAM92BQ6ZTR7 304 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 ZNF551Q7Z340 670 aaPredicted RBP8.15□□□□□ -1.1
TPM3-213ENST00000368545 PTOV1Q86YD1 416 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 LILRA2Q8N149 483 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 C10orf111Q8N326 155 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 PNPT1Q8TCS8 783 aaKnown RBP8.15□□□□□ -1.1
TPM3-213ENST00000368545 NCSTNQ92542 709 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 AMDHD1Q96NU7 426 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 TRIM4Q9C037 500 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 GLIPR2Q9H4G4 154 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 ANKHQ9HCJ1 492 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 FAM60AQ9NP50 221 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 DLL4Q9NR61 685 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 AGPAT4Q9NRZ5 378 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 TMEM140Q9NV12 185 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 TMEM160Q9NX00 188 aa8.15□□□□□ -1.1
TPM3-213ENST00000368545 SOHLH2Q9NX45 425 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms