RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 STX5Q13190 355 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 ITGADQ13349 1161 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 LTB4RQ15722 352 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 STK11Q15831 433 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 TRMT12Q53H54 448 aaKnown RBP12.95□□□□□ -0.34
VAMP4-202ENST00000367740 CT45A2Q5DJT8 189 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 NPSR1Q6W5P4 371 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 Q6ZSR9 355 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 BHLHA15Q7RTS1 189 aaPredicted RBP12.95□□□□□ -0.34
VAMP4-202ENST00000367740 TXLNBQ8N3L3 684 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 SPATA6LQ8N4H0 392 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 FAM216AQ8WUB2 273 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 EFHD2Q96C19 240 aaPredicted RBP12.95□□□□□ -0.34
VAMP4-202ENST00000367740 USB1Q9BQ65 265 aaKnown RBP12.95□□□□□ -0.34
VAMP4-202ENST00000367740 RTN4RQ9BZR6 473 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 CD244Q9BZW8 370 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 DERL2Q9GZP9 239 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 PPANQ9NQ55 473 aaKnown RBP12.95□□□□□ -0.34
VAMP4-202ENST00000367740 PRODH2Q9UF12 536 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 PSAT1Q9Y617 370 aa12.95□□□□□ -0.34
VAMP4-202ENST00000367740 SYNGR4O95473 234 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 PTX3P26022 381 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-202ENST00000367740 FABP6P51161 128 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 PNLIPRP2P54317 469 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 MRPS35P82673 323 aaKnown RBP12.94□□□□□ -0.34
VAMP4-202ENST00000367740 OR4D1Q15615 310 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 GLYR1Q49A26 553 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-202ENST00000367740 AWAT1Q58HT5 328 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 LGSNQ5TDP6 509 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 TTC27Q6P3X3 843 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 TRMT10BQ6PF06 316 aaKnown RBP12.94□□□□□ -0.34
VAMP4-202ENST00000367740 RINLQ6ZS11 566 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 IGDCC3Q8IVU1 814 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 LRRC17Q8N6Y2 441 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 RADILQ96JH8 1075 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 PTGES2Q9H7Z7 377 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 PAQR5Q9NXK6 330 aaPredicted RBP12.94□□□□□ -0.34
VAMP4-202ENST00000367740 CD274Q9NZQ7 290 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 ARMCX1Q9P291 453 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 TSC22D4Q9Y3Q8 395 aa12.94□□□□□ -0.34
VAMP4-202ENST00000367740 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
VAMP4-202ENST00000367740 LYZL6O75951 148 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 WISP3O95389 354 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-202ENST00000367740 PCSK2P16519 638 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 KRT20P35900 424 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 FEN1P39748 380 aaKnown RBP12.93□□□□□ -0.34
VAMP4-202ENST00000367740 CUL3Q13618 768 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 IQCCQ4KMZ1 466 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 TREML4Q6UXN2 200 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 DEF8Q6ZN54 512 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 ZC3HC1Q86WB0 502 aaKnown RBP12.93□□□□□ -0.34
VAMP4-202ENST00000367740 TDRPQ86YL5 185 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 RNF10Q8N5U6 811 aaKnown RBP12.93□□□□□ -0.34
VAMP4-202ENST00000367740 ABHD3Q8WU67 409 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 KCTD4Q8WVF5 259 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 FOXN4Q96NZ1 517 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 METTL17Q9H7H0 456 aaPredicted RBP12.93□□□□□ -0.34
VAMP4-202ENST00000367740 ANKRA2Q9H9E1 313 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 SAYSD1Q9NPB0 183 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 FLRT3Q9NZU0 649 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 POU2F3Q9UKI9 436 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 CES1P1Q9UKY3 287 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 RYR3Q15413 4870 aa12.93□□□□□ -0.34
VAMP4-202ENST00000367740 LRP5LA4QPB2 252 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 GOLGA6L10A6NI86 522 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 ZNF814B7Z6K7 855 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 TNFSF11O14788 317 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 ADAMDEC1O15204 470 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 FADS1O60427 444 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 RGS9O75916 674 aaPredicted RBP12.92□□□□□ -0.34
VAMP4-202ENST00000367740 OPN1LWP04000 364 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 IL2RGP31785 369 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 LGALS3BPQ08380 585 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 MSS51Q4VC12 460 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 TMEM201Q5SNT2 666 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 ZNF544Q6NX49 715 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 SLC48A1Q6P1K1 146 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 SLC22A25Q6T423 547 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 OR4N2Q8NGD1 307 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 OR2V1Q8NHB1 315 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 UHMK1Q8TAS1 419 aaKnown RBP12.92□□□□□ -0.34
VAMP4-202ENST00000367740 RNF128Q8TEB7 428 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 MAIP1Q8WWC4 291 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 VSTM2LQ96N03 204 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 SORCS2Q96PQ0 1159 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 NPAS1Q99742 590 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 DESI2Q9BSY9 194 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 BPESC1Q9GZL8 116 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 POPDC3Q9HBV1 291 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 KLHL13Q9P2N7 655 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 PCDHGB1Q9Y5G3 927 aa12.92□□□□□ -0.34
VAMP4-202ENST00000367740 ERAL1O75616 437 aaKnown RBP12.91□□□□□ -0.34
VAMP4-202ENST00000367740 CTAGE8P0CG41 777 aa12.91□□□□□ -0.34
VAMP4-202ENST00000367740 ZNF17P17021 662 aa12.91□□□□□ -0.34
VAMP4-202ENST00000367740 CARTPTQ16568 116 aa12.91□□□□□ -0.34
VAMP4-202ENST00000367740 FAM180BQ6P0A1 224 aa12.91□□□□□ -0.34
VAMP4-202ENST00000367740 PEG10Q86TG7 708 aaKnown RBP12.91□□□□□ -0.34
VAMP4-202ENST00000367740 MYLK4Q86YV6 388 aaPredicted RBP12.91□□□□□ -0.34
VAMP4-202ENST00000367740 WDR75Q8IWA0 830 aaKnown RBP12.91□□□□□ -0.34
VAMP4-202ENST00000367740 CTAGE4Q8IX94 777 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms