RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 DDX4Q9NQI0 724 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 H3BN98 237 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR10H3O60404 316 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CORO1AP31146 461 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 BCL6P41182 706 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF239Q16600 458 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PRAMEF19Q5SWL8 479 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF584Q8IVC4 421 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NLGN4XQ8N0W4 816 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NHLRC2Q8NBF2 726 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NLGN4YQ8NFZ3 816 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PITX2Q99697 317 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 C4orf47A7E2U8 309 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 STATHP02808 62 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CHRM2P08172 466 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GM2AP17900 193 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PYCR1P32322 319 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MAGEB1P43366 347 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SNAPC2Q13487 334 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MPV17LQ2QL34 196 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NSUN5P2Q63ZY6 315 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 C12orf54Q6X4T0 127 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 LRRTM1Q86UE6 522 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PLPP6Q8IY26 295 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 METTL4Q8N3J2 472 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 DCUN1D4Q92564 292 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MARCH5Q9NX47 278 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 HSD11B2P80365 405 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 RAB33AQ14088 237 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 UPP1Q16831 310 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 RPS27LQ71UM5 84 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 C9orf40Q8IXQ3 194 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MRPS24Q96EL2 167 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 A6NIN4 97 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CTDSPLO15194 276 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 EPHB6O15197 1021 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR2T1O43869 369 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR5F1O95221 314 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 LPLP06858 475 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 EPHX1P07099 455 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 LUMP51884 338 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PDX1P52945 283 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MFGE8Q08431 387 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FSTL4Q6MZW2 842 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FANK1Q8TC84 345 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF606Q8WXB4 792 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MYADMQ96S97 322 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 WDR18Q9BV38 432 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 RRAGCQ9HB90 399 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 B3GAT2Q9NPZ5 323 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 AIG1Q9NVV5 245 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CA5BQ9Y2D0 317 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1B0GV72 72 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR6C74A6NCV1 312 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CA11O75493 328 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 IGKV5-2P06315 115 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GPR19Q15760 415 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 L3MBTL4Q8NA19 623 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SUSD6Q92537 303 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TMIGD2Q96BF3 282 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 DPH2Q9BQC3 489 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 DUSP21Q9H596 190 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FBXO10Q9UK96 956 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 E9PI62 339 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 JCHAINP01591 159 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 BPIP17213 487 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CR2P20023 1033 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 IDH2P48735 452 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TAS2R20P59543 309 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 UBE2NLQ5JXB2 153 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OR6B3Q8NGW1 331 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SLC25A46Q96AG3 418 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SLC7A7Q9UM01 511 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 H7C1C5 153 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 LINC01387J3KSC0 135 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PRNPP04156 253 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 LAG3P18627 525 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ICAM3P32942 547 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GIPRP48546 466 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 IDH3AP50213 366 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ECM1Q16610 540 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FGD3Q5JSP0 725 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FRG2Q64ET8 278 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CHRDL2Q6WN34 429 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 SLC35F2Q8IXU6 374 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF669Q96BR6 464 aaPredicted RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 DNAJA3Q96EY1 480 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 FRG2BQ96QU4 278 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 TNS2Q63HR2 1409 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 XYLBO75191 536 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 MT-ATP6P00846 226 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 CD247P20963 164 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 GTF2E2P29084 291 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 EEF1A1P68104 462 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 BCL7AQ4VC05 210 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 EEF1A1P5Q5VTE0 462 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 NCEH1Q6PIU2 408 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 PAPD4Q6PIY7 484 aaKnown RBP3.56□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF730Q6ZMV8 503 aa3.56□□□□□ -1.84
SYNE1-207ENST00000367255 OVCH2Q7RTZ1 564 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms