RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 TMEM59LQ9UK28 342 aa14.86□□□□□ -0.03
NUCKS1-201ENST00000367142 SLC35A3Q9Y2D2 325 aa14.86□□□□□ -0.03
NUCKS1-201ENST00000367142 NUDT21O43809 227 aaKnown RBP14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 RDH16O75452 317 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 C7P10643 843 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 TAS2R31P59538 309 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 ACOT13Q9NPJ3 140 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 PCTPQ9UKL6 214 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 SLC6A5Q9Y345 797 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 C10orf71Q711Q0 1435 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 RRP8O43159 456 aaKnown RBP14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 COMMD6Q7Z4G1 85 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 TMEM150AQ86TG1 271 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 PDZD3Q86UT5 571 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 TMEM151AQ8N4L1 468 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 OR4K15Q8NH41 348 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 RNF128Q8TEB7 428 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 TRMT2BQ96GJ1 504 aaKnown RBP14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 OR4K3Q96R72 315 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 PLEK2Q9NYT0 353 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 EDARQ9UNE0 448 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 POLHQ9Y253 713 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 B3GNT3Q9Y2A9 372 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 HSBP1L1C9JCN9 74 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 ZNF780AO75290 641 aaPredicted RBP14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 ZNF865P0CJ78 1059 aaPredicted RBP14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 MTNR1AP48039 350 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 PLCXD3Q63HM9 321 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 IGDCC3Q8IVU1 814 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 SGPP2Q8IWX5 399 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 ATOH1Q92858 354 aaPredicted RBP14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 TOMM40LQ969M1 308 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 COG8Q96MW5 612 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 PISDQ9UG56 409 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 NFAT5O94916 1531 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 STK17BO94768 372 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 CEBPBP17676 345 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 ZNF136P52737 540 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 NTHL1P78549 312 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 SCAPQ12770 1279 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 IGFN1Q86VF2 1251 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 PPP1R3BQ86XI6 285 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 DTX3Q8N9I9 347 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 MRPL15Q9P015 296 aaKnown RBP14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 HSPE1-MOB4S4R3N1 261 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 ROBO1Q9Y6N7 1651 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 FAM230AA0A1W2PPH8 454 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 KCNK5O95279 499 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 CAMK2DQ13557 499 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 TCEAL8Q8IYN2 117 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 OR5AR1Q8NGP9 310 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 APMAPQ9HDC9 416 aa14.85□□□□□ -0.03
NUCKS1-201ENST00000367142 C17orf113A0A1B0GUU1 675 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 KIAA0513O60268 411 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 ETFAP13804 333 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 DNASE1P24855 282 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 GLO1Q04760 184 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 RAB41Q5JT25 222 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 PHOSPHO2Q8TCD6 241 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 OR14A2Q96R54 314 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 MGLLQ99685 303 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 ARL6Q9H0F7 186 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 ERVK13-1Q9NX77 482 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 ABCC6O95255 1503 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 A0A0A6YYC8 382 aaPredicted RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 I3L1I5 382 aaPredicted RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 SNAP29O95721 258 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 RRADP55042 308 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 VWA5B2Q8N398 1253 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 PITHD1Q9GZP4 211 aaPredicted RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 LSM5Q9Y4Y9 91 aaKnown RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 CENPBD1B2RD01 187 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 KNG1P01042 644 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 ARSAP15289 507 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 MSR1P21757 451 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 VASPP50552 380 aaPredicted RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 NADSYN1Q6IA69 706 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 DPPA4Q7L190 304 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 MAELQ96JY0 434 aaKnown RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 MYADMQ96S97 322 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 PINK1Q9BXM7 581 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 PREBQ9HCU5 417 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 GCM1Q9NP62 436 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 CCM2LQ9NUG4 571 aaPredicted RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 NEURL4Q96JN8 1562 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 SNED1Q8TER0 1413 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 HMX3A6NHT5 357 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 CYBAP13498 195 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 CAV2P51636 162 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 GALNT1Q10472 559 aaPredicted RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 TLDC1Q6P9B6 456 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 HLA-CQ95604 372 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 SLC45A3Q96JT2 553 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 TP63Q9H3D4 680 aaPredicted RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 MARCH4Q9P2E8 410 aaPredicted RBP14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 GJD2Q9UKL4 321 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 MPIG6BO95866 241 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 CX3CR1P49238 355 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 OR4D1Q15615 310 aa14.84□□□□□ -0.03
NUCKS1-201ENST00000367142 MCATQ8IVS2 390 aaKnown RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms