RNA–Protein interactions for RNA: ENST00000360831.9

NLE1-201, Transcript of notchless homolog 1, humanhuman

TSL 5 BASIC

Gene NLE1, Length 1,726 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-201ENST00000360831 KLHL3Q9UH77 587 aa16.95■□□□□ 0.3
NLE1-201ENST00000360831 ZNF229Q9UJW7 825 aa16.95■□□□□ 0.3
NLE1-201ENST00000360831 PCDHGB6Q9Y5F9 930 aa16.95■□□□□ 0.3
NLE1-201ENST00000360831 HS3ST3A1Q9Y663 406 aa16.95■□□□□ 0.3
NLE1-201ENST00000360831 MN1Q10571 1320 aaPredicted RBP16.94■□□□□ 0.3
NLE1-201ENST00000360831 HYKKA2RU49 373 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 POM121BA6NF01 834 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 PATE3B3GLJ2 98 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 H0Y8X5 98 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 PTTG1O95997 202 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 CFIP05156 583 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 SMIM10L1P0DMW3 83 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 SOX3P41225 446 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 LSM11P83369 360 aaKnown RBP eCLIP16.94■□□□□ 0.3
NLE1-201ENST00000360831 KRR1Q13601 381 aaKnown RBP16.94■□□□□ 0.3
NLE1-201ENST00000360831 C1DQ13901 141 aaKnown RBP16.94■□□□□ 0.3
NLE1-201ENST00000360831 TRIM61Q5EBN2 209 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 PRICKLE2Q7Z3G6 844 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 VRK2Q86Y07 508 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 POC5Q8NA72 575 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 OR4E2Q8NGC2 313 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 SLC35A4Q96G79 324 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 SMIM10Q96HG1 83 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 POLR2J2Q9GZM3 115 aaKnown RBP16.94■□□□□ 0.3
NLE1-201ENST00000360831 SMOC1Q9H4F8 434 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 SMURF1Q9HCE7 757 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 ANKMY1Q9P2S6 941 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 PCOLCE2Q9UKZ9 415 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 TRAPPC4Q9Y296 219 aa16.94■□□□□ 0.3
NLE1-201ENST00000360831 GPR55Q9Y2T6 319 aaPredicted RBP16.94■□□□□ 0.3
NLE1-201ENST00000360831 ZNF670-ZNF695F2Z2N8 137 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 MYL12BO14950 172 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SCAMP1O15126 338 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 UBXN7O94888 489 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 EML2O95834 649 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 AGR2O95994 175 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 PSMA1P25786 263 aaKnown RBP16.93■□□□□ 0.3
NLE1-201ENST00000360831 GTF2E2P29084 291 aaKnown RBP16.93■□□□□ 0.3
NLE1-201ENST00000360831 STAT5AP42229 794 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SPEM2Q0P670 501 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 ST3GAL3Q11203 375 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SNAPC1Q16533 368 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 DECR1Q16698 335 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SLC23A3Q6PIS1 610 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SAMD14Q8IZD0 417 aaPredicted RBP16.93■□□□□ 0.3
NLE1-201ENST00000360831 GALNT6Q8NCL4 622 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 TEX47Q8TBZ9 253 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 TM4SF19Q96DZ7 209 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 LRR1Q96L50 414 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 BMFQ96LC9 184 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SAP130Q9H0E3 1048 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 EXOSC4Q9NPD3 245 aaKnown RBP16.93■□□□□ 0.3
NLE1-201ENST00000360831 PRDM9Q9NQV7 894 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SEMA4GQ9NTN9 838 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 PHF11Q9UIL8 331 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SSR3Q9UNL2 185 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 CHST2Q9Y4C5 530 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 GPR179Q6PRD1 2367 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 A0A1W2PR77 199 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 GSAPA4D1B5 854 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 DUXAA6NLW8 204 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 KDM4EB2RXH2 506 aaPredicted RBP16.93■□□□□ 0.3
NLE1-201ENST00000360831 BTN3A3O00478 584 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 TNFSF14O43557 240 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 WNT1P04628 370 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 ZNF888P0CJ79 500 aaPredicted RBP16.93■□□□□ 0.3
NLE1-201ENST00000360831 ACP2P11117 423 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 CPEP16870 476 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 IFNA8P32881 189 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 RPS19P39019 145 aaKnown RBP16.93■□□□□ 0.3
NLE1-201ENST00000360831 TNFRSF17Q02223 184 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 NFATC4Q14934 902 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 LTB4RQ15722 352 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 FAM214AQ32MH5 1076 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SPANXN2Q5MJ10 180 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 CDC73Q6P1J9 531 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 FBXO42Q6P3S6 717 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 PAQR6Q6TCH4 344 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 C16orf62Q7Z3J2 963 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 ABI3BPQ7Z7G0 1075 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 PHC2Q8IXK0 858 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 KCT2Q8NC54 265 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 FLVCR1-AS1Q8TAF5 88 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 PIGXQ8TBF5 258 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 FAM174AQ8TBP5 190 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 KAT2AQ92830 837 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 SLC22A18Q96BI1 424 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 KLHDC7BQ96G42 594 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 CCDC32Q9BV29 185 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 PLA2G12AQ9BZM1 189 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 QRSL1Q9H0R6 528 aaKnown RBP16.93■□□□□ 0.3
NLE1-201ENST00000360831 EQTNQ9NQ60 294 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 CTPS2Q9NRF8 586 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 KLHL28Q9NXS3 571 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 KCMF1Q9P0J7 381 aa16.93■□□□□ 0.3
NLE1-201ENST00000360831 ZNF624Q9P2J8 865 aaPredicted RBP16.93■□□□□ 0.3
NLE1-201ENST00000360831 SNTNA6NMZ2 147 aa16.92■□□□□ 0.3
NLE1-201ENST00000360831 CTDSP2O14595 271 aa16.92■□□□□ 0.3
NLE1-201ENST00000360831 KHNYNO15037 678 aaKnown RBP16.92■□□□□ 0.3
NLE1-201ENST00000360831 PRODHO43272 600 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms