RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 BTBD9Q96Q07 612 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 C8orf4Q9NR00 106 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 ASB6Q9NWX5 421 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 MYOTQ9UBF9 498 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 CCNB2O95067 398 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 TPOP07202 933 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 C8BP07358 591 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 ZNF84P51523 738 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 EPS8Q12929 822 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 CHAF1BQ13112 559 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 CPZQ66K79 652 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 AMER3Q8N944 861 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 PIK3R3Q92569 461 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 EXTL1Q92935 676 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 SLC25A36Q96CQ1 311 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 RNF121Q9H920 327 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 ZMIZ1Q9ULJ6 1067 aa8.51□□□□□ -1.05
UPF2-202ENST00000357604 TRGV8A0A0C4DH27 118 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 EIF1BO60739 113 aaKnown RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 PRKRAO75569 313 aaKnown RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 SAGP10523 405 aaPredicted RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 APOBEC1P41238 236 aaKnown RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 RAD23AP54725 363 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 RPS7P62081 194 aaKnown RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 TRAM2Q15035 370 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 LTB4RQ15722 352 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ATG16L2Q8NAA4 619 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 GATSQ8NAP1 163 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 SLC25A18Q9H1K4 315 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 KRT84Q9NSB2 600 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 TAS2R10Q9NYW0 307 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 IGKV1-8A0A0C4DH67 115 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 HTR3EA5X5Y0 456 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 OR6C70A6NIJ9 312 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 H3BML4 177 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 CYR61O00622 381 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 PPP6CO00743 305 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 SEC14L5O43304 696 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 GPIP06744 558 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 SBK3P0C264 359 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 OCM2P0CE71 109 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 OCMP0CE72 109 aaPredicted RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 KCNC4Q03721 635 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 FAM109AQ8N4B1 249 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ASB5Q8WWX0 329 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 RAB8BQ92930 207 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ANKRD9Q96BM1 317 aaPredicted RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 TMEM19Q96HH6 336 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 SEPHS2Q99611 448 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 SLC39A3Q9BRY0 314 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 CPNE5Q9HCH3 593 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 PARPBPQ9NWS1 579 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ASB1Q9Y576 335 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 GPC6Q9Y625 555 aaPredicted RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 H6PDO95479 791 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 SOX3P41225 446 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 MRPL19P49406 292 aaKnown RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 PMS2P3Q13401 168 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 MRPL49Q13405 166 aaKnown RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 PRICKLE4Q2TBC4 344 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ZNF585AQ6P3V2 769 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ZNF793Q6ZN11 406 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 SH2D5Q6ZV89 423 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 MAMDC2Q7Z304 686 aaPredicted RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 FLVCR1-AS1Q8TAF5 88 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 QPCTLQ9NXS2 382 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 POFUT2Q9Y2G5 429 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 PMS2P1A4D2B8 440 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 K7ENP7 123 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 OR2T1O43869 369 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 B3GALT4O96024 378 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ERCC1P07992 297 aaPredicted RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 AQP1P29972 269 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 CDK9P50750 372 aaKnown RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 CLRN1P58418 232 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 MRPS35P82673 323 aaKnown RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 MRPL14Q6P1L8 145 aaKnown RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 INO80CQ6PI98 192 aaPredicted RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 Q6ZSR9 355 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 PIGWQ7Z7B1 504 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 PLCZ1Q86YW0 608 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 OR2L13Q8N349 312 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 DPP10Q8N608 796 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 PSD4Q8NDX1 1056 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 C16orf52Q8NHV5 167 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 MCHR1Q99705 422 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 RNF32Q9H0A6 362 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 CCNB1IP1Q9NPC3 277 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 IGLV3-12A0A075B6K2 115 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 SOCS6O14544 535 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 SMIM10L1P0DMW3 83 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ZNF23P17027 643 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 VMACQ2NL98 169 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 LRIF1Q5T3J3 769 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 PRAMEF20Q5VT98 475 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 PPP1R32Q7Z5V6 425 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 BMPERQ8N8U9 685 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ST8SIA1Q92185 356 aa8.5□□□□□ -1.05
UPF2-202ENST00000357604 ABTB1Q969K4 478 aaPredicted RBP8.5□□□□□ -1.05
UPF2-202ENST00000357604 SMIM10Q96HG1 83 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms