RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 HOXD1Q9GZZ0 328 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 HS3ST4Q9Y661 456 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.19□□□□□ -0.46
SMC4-202ENST00000357388 CD300LBA8K4G0 201 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 RAB40ALP0C0E4 278 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 CD9P21926 228 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 HNRNPKP61978 463 aaKnown RBP eCLIP12.19□□□□□ -0.465e-13■■■■■ 46
SMC4-202ENST00000357388 GALK2Q01415 458 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 GRM2Q14416 872 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 MELKQ14680 651 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 LRIT3Q3SXY7 679 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 ACTBL2Q562R1 376 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 LY6G5CQ5SRR4 150 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 STEAP4Q687X5 459 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 CMIPQ8IY22 773 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 IQCF1Q8N6M8 205 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 RAB40AQ8WXH6 277 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 MSI2Q96DH6 328 aaKnown RBP12.19□□□□□ -0.46
SMC4-202ENST00000357388 MVB12BQ9H7P6 319 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 SERTAD4Q9NUC0 356 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 C2orf42Q9NWW7 574 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 GIMAP2Q9UG22 337 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 CCDC163A0A0D9SF12 145 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 TCRBV21S2A2A0A5A6 115 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 J3QR89 54 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 GNB3P16520 340 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 PRPS1P60891 318 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 OR6V1Q8N148 313 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 LRRC25Q8N386 305 aaPredicted RBP12.19□□□□□ -0.46
SMC4-202ENST00000357388 DTX3Q8N9I9 347 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 OR56B4Q8NH76 319 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 ALG8Q9BVK2 526 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 ZBTB20Q9HC78 741 aaPredicted RBP12.19□□□□□ -0.46
SMC4-202ENST00000357388 SMCO4Q9NRQ5 59 aa12.19□□□□□ -0.46
SMC4-202ENST00000357388 FAM212BQ9NTI7 297 aaPredicted RBP12.19□□□□□ -0.46
SMC4-202ENST00000357388 AJAP1Q9UKB5 411 aaPredicted RBP12.19□□□□□ -0.46
SMC4-202ENST00000357388 TSPAN11A1L157 253 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 GGT3PA6NGU5 568 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 ARGFXA6NJG6 315 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 CNOT4O95628 575 aaKnown RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 GGT2P36268 569 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 SUOXP51687 545 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 CYP27C1Q4G0S4 372 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 RBMS3Q6XE24 437 aaKnown RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 TMPRSS7Q7RTY8 843 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 MAMDC2Q7Z304 686 aaPredicted RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 FAM122BQ7Z309 247 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 C6orf120Q7Z4R8 191 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 SIAH1Q8IUQ4 282 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 KRTCAP2Q8N6L1 136 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 KCTD12Q96CX2 325 aaKnown RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 FBRSQ9HAH7 460 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 SLC22A11Q9NSA0 550 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 TMEM98Q9Y2Y6 226 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 CDHR4A6H8M9 788 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 C11orf98E9PRG8 122 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 AGPAT2O15120 278 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 EGFP01133 1207 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 SERPINE2P07093 398 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 SLURP2P0DP57 97 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 GABRA3P34903 492 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 CRYZQ08257 329 aaKnown RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 LRP8Q14114 963 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 TFAP2CQ92754 450 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 SRA1Q9HD15 236 aaKnown RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 THSD1Q9NS62 852 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 SDHAF2Q9NX18 166 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 PCDHGA6Q9Y5G7 932 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 A6NLC8 198 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 NUDT19A8MXV4 375 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 MED6O75586 246 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 CX3CR1P49238 355 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 TPMTP51580 245 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 TBCEQ15813 527 aaPredicted RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 KIAA0895LQ68EN5 471 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 SLC6A19Q695T7 634 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 OR52E8Q6IFG1 317 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 ZNF425Q6IV72 752 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 SLC5A8Q8N695 610 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 HORMAD2Q8N7B1 307 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 OR52E2Q8NGJ4 325 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 QRSL1Q9H0R6 528 aaKnown RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 OR52A5Q9H2C5 316 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 RARRES3Q9UL19 164 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 PRSS44E7EML9 344 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 RFXAPO00287 272 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 NUPL2O15504 423 aaKnown RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 ADORA3P0DMS8 318 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 IL13RA1P78552 427 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 VEZF1Q14119 521 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 TATDN3Q17R31 274 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 RNF111Q6ZNA4 994 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 HIST2H3AQ71DI3 136 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 ASPGQ86U10 573 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 ZNF546Q86UE3 836 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 ZFP41Q8N8Y5 198 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 OR4K5Q8NGD3 323 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 ST7LQ8TDW4 575 aa12.18□□□□□ -0.46
SMC4-202ENST00000357388 NANOS1Q8WY41 292 aaKnown RBP12.18□□□□□ -0.46
SMC4-202ENST00000357388 UPRTQ96BW1 309 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms