RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 CCNJQ5T5M9 372 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 GARNL3Q5VVW2 1013 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
TRIM4-203ENST00000355947 C11orf88Q6PI97 169 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 IDO2Q6ZQW0 420 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 NR2C2APQ86WQ0 139 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 OR4N5Q8IXE1 308 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 ADGRF3Q8IZF5 1079 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 MEIOBQ8N635 442 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 SIRT6Q8N6T7 355 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 ALG8Q9BVK2 526 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 FXYD6Q9H0Q3 95 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 TTYH1Q9H313 450 aaPredicted RBP12.77□□□□□ -0.37
TRIM4-203ENST00000355947 TM7SF3Q9NS93 570 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 EXOSC1Q9Y3B2 195 aaKnown RBP12.77□□□□□ -0.37
TRIM4-203ENST00000355947 Q9Y3F1 56 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 CCL16O15467 120 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 APOC3P02656 99 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 GKN3PP0CG01 181 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 CYBAP13498 195 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 POLR2CP19387 275 aaPredicted RBP12.77□□□□□ -0.37
TRIM4-203ENST00000355947 LIMS1P48059 325 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 MAP2K6P52564 334 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 HSF2Q03933 536 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 C3orf38Q5JPI3 329 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 DGLUCYQ7Z3D6 616 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 SLC9B2Q86UD5 537 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 SRFBP1Q8NEF9 429 aaKnown RBP12.77□□□□□ -0.37
TRIM4-203ENST00000355947 TMEM255BQ8WV15 326 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 IFT27Q9BW83 186 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 SLC25A18Q9H1K4 315 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 MYNNQ9NPC7 610 aa12.77□□□□□ -0.37
TRIM4-203ENST00000355947 HINT3Q9NQE9 182 aaKnown RBP12.77□□□□□ -0.37
TRIM4-203ENST00000355947 PLXNA4Q9HCM2 1894 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 PLXND1Q9Y4D7 1925 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 UGDHO60701 494 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 PNLIPRP1P54315 467 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 HES5Q5TA89 166 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 CXXC5Q7LFL8 322 aaKnown RBP12.76□□□□□ -0.37
TRIM4-203ENST00000355947 ARHGAP9Q9BRR9 750 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 SEMA4GQ9NTN9 838 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 ZSCAN32Q9NX65 697 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 NFKBIL1Q9UBC1 381 aaPredicted RBP12.76□□□□□ -0.37
TRIM4-203ENST00000355947 TRBV23OR9-2A0A075B6M9 112 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 PRAMEF27A3QJZ7 478 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 SLC16A5O15375 505 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 SLCO2B1O94956 709 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 CHRM4P08173 479 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 TFPIP10646 304 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 NTSP30990 170 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 VEGFCP49767 419 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 BLVRAP53004 296 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 TPBGQ13641 420 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 AANATQ16613 207 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 OCLNQ16625 522 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 TP53I3Q53FA7 332 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 ARSKQ6UWY0 536 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 ZNF687Q8N1G0 1237 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 PCSK9Q8NBP7 692 aaKnown RBP12.76□□□□□ -0.37
TRIM4-203ENST00000355947 OR56A3Q8NH54 315 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 GRHL3Q8TE85 626 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 OR5P2Q8WZ92 322 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 RFKQ969G6 155 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 MCHR1Q99705 422 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 GPR174Q9BXC1 333 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 BTBD1Q9H0C5 482 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 RANBP3Q9H6Z4 567 aaPredicted RBP12.76□□□□□ -0.37
TRIM4-203ENST00000355947 HCFC1R1Q9NWW0 138 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 MGAT4CQ9UBM8 478 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 WNT6Q9Y6F9 365 aa12.76□□□□□ -0.37
TRIM4-203ENST00000355947 TCRBV16S1A1N1A0A5B0 115 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 TMEM189-UBE2V1I3L0A0 370 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 L7N2F9 121 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ARPC5O15511 151 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ERI3O43414 337 aaKnown RBP12.75□□□□□ -0.37
TRIM4-203ENST00000355947 CHST10O43529 356 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 FMO6PO60774 539 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 FZD7O75084 574 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ADAMTS4O75173 837 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 LRG1P02750 347 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 HPXP02790 462 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 POU3F2P20265 443 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-203ENST00000355947 DEFA5Q01523 94 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ST3GAL2Q16842 350 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 CDKL4Q5MAI5 379 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 NDUFAF5Q5TEU4 345 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 TMEM65Q6PI78 240 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ZNF782Q6ZMW2 699 aaPredicted RBP12.75□□□□□ -0.37
TRIM4-203ENST00000355947 RTL4Q6ZR62 310 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 CPA6Q8N4T0 437 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 OR4Q3Q8NH05 313 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 RPLP0P6Q8NHW5 317 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 ADAMTS19Q8TE59 1207 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 CREB3L1Q96BA8 519 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 HHIPQ96QV1 700 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 DPH7Q9BTV6 452 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 TMEM138Q9NPI0 162 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 RCE1Q9Y256 329 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 MAB21L2Q9Y586 359 aa12.75□□□□□ -0.37
TRIM4-203ENST00000355947 A0A1W2PPL8 197 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms