RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 BNC1Q01954 994 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 ZFP69Q49AA0 526 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 YAF2Q8IY57 180 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 OR51G2Q8NGK0 314 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 SLC17A9Q9BYT1 436 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 PRRG3Q9BZD7 231 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 SF3B6Q9Y3B4 125 aaKnown RBP18.29■□□□□ 0.52
COL13A1-201ENST00000354547 CEP290O15078 2479 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 CDC42EP2O14613 210 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 STXBP1P61764 594 aaKnown RBP18.29■□□□□ 0.52
COL13A1-201ENST00000354547 GDF7Q7Z4P5 450 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 KLBQ86Z14 1044 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 SFXN5Q8TD22 340 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 SLC41A3Q96GZ6 507 aa18.29■□□□□ 0.52
COL13A1-201ENST00000354547 ZNF764Q96H86 408 aaPredicted RBP18.29■□□□□ 0.52
COL13A1-201ENST00000354547 H2AFY2Q9P0M6 372 aaPredicted RBP18.29■□□□□ 0.52
COL13A1-201ENST00000354547 NDRG2Q9UN36 371 aaKnown RBP18.29■□□□□ 0.52
COL13A1-201ENST00000354547 CA3P07451 260 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 IGFALSP35858 605 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 RACK1P63244 317 aaKnown RBP18.28■□□□□ 0.52
COL13A1-201ENST00000354547 P2RY14Q15391 338 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 CCDC85BQ15834 202 aaPredicted RBP18.28■□□□□ 0.52
COL13A1-201ENST00000354547 BCL2A1Q16548 175 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 CPOQ8IVL8 374 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 CCL4L1Q8NHW4 92 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 SETD6Q8TBK2 473 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 SPRYD4Q8WW59 207 aaPredicted RBP18.28■□□□□ 0.52
COL13A1-201ENST00000354547 WDFY2Q96P53 400 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 ARHGAP9Q9BRR9 750 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 TBC1D29Q9UFV1 150 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 SNX7Q9UNH6 387 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 TMEM129A0AVI4 362 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 ATXN8OSP0DMR3 200 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 SLC16A1P53985 500 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 SLC25A30Q5SVS4 291 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 RNLSQ5VYX0 342 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 XKRXQ6PP77 449 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 RASSF6Q6ZTQ3 369 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 CLDN22Q8N7P3 220 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 IL17RCQ8NAC3 791 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 ZNF681Q96N22 645 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 ACTRT3Q9BYD9 372 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 SLC22A4Q9H015 551 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 FGF20Q9NP95 211 aaPredicted RBP18.28■□□□□ 0.52
COL13A1-201ENST00000354547 TMEM74BQ9NUR3 256 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 EIF2S1P05198 315 aaKnown RBP18.28■□□□□ 0.52
COL13A1-201ENST00000354547 PRG2P13727 222 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 CD83Q01151 205 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 GPM6BQ13491 265 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 TPBGQ13641 420 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 AGERQ15109 404 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 CNIH2Q6PI25 160 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 QSOX2Q6ZRP7 698 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 MSLNLQ96KJ4 702 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 FYTTD1Q96QD9 318 aaKnown RBP18.28■□□□□ 0.52
COL13A1-201ENST00000354547 ARHGDIGQ99819 225 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 RSPH9Q9H1X1 276 aaPredicted RBP18.28■□□□□ 0.52
COL13A1-201ENST00000354547 ADAP2Q9NPF8 381 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 WDR45Q9Y484 360 aa18.28■□□□□ 0.52
COL13A1-201ENST00000354547 SHISA3A0PJX4 238 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 POM121BA6NF01 834 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 H0Y8X5 98 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 POLR1CO15160 346 aaPredicted RBP18.27■□□□□ 0.52
COL13A1-201ENST00000354547 HRO43593 1189 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 CPN2P22792 545 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 IL18Q14116 193 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 PUS10Q3MIT2 529 aaKnown RBP18.27■□□□□ 0.52
COL13A1-201ENST00000354547 FCRLBQ6BAA4 426 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 NEIL3Q8TAT5 605 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 ST6GAL2Q96JF0 529 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 DPH1Q9BZG8 443 aa18.27■□□□□ 0.52
COL13A1-201ENST00000354547 ISG20L2Q9H9L3 353 aaKnown RBP18.27■□□□□ 0.52
COL13A1-201ENST00000354547 MOV10Q9HCE1 1003 aaKnown RBP18.27■□□□□ 0.52
COL13A1-201ENST00000354547 SPTBN5Q9NRC6 3674 aaKnown RBP18.27■□□□□ 0.52
COL13A1-201ENST00000354547 EXOSC1Q9Y3B2 195 aaKnown RBP18.27■□□□□ 0.52
COL13A1-201ENST00000354547 SURF4O15260 269 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 PRICKLE3O43900 615 aaPredicted RBP18.27■□□□□ 0.51
COL13A1-201ENST00000354547 GABRA5P31644 462 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 FAM214AQ32MH5 1076 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 PLBD1Q6P4A8 553 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 AMIGO1Q86WK6 493 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 NRROSQ86YC3 692 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 OR10G6Q8NH81 332 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 ENKURQ8TC29 256 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 SMAP2Q8WU79 429 aaPredicted RBP18.27■□□□□ 0.51
COL13A1-201ENST00000354547 ACOT11Q8WXI4 607 aaPredicted RBP18.27■□□□□ 0.51
COL13A1-201ENST00000354547 TIMM29Q9BSF4 260 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 RPP25Q9BUL9 199 aaKnown RBP18.27■□□□□ 0.51
COL13A1-201ENST00000354547 APOOQ9BUR5 198 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 RANGRFQ9HD47 186 aaPredicted RBP18.27■□□□□ 0.51
COL13A1-201ENST00000354547 PLSCR3Q9NRY6 295 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 ITGB1BP2Q9UKP3 347 aa18.27■□□□□ 0.51
COL13A1-201ENST00000354547 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 CENPXA8MT69 81 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 HYAL3O43820 417 aaPredicted RBP18.26■□□□□ 0.51
COL13A1-201ENST00000354547 RNGTTO60942 597 aaKnown RBP18.26■□□□□ 0.51
COL13A1-201ENST00000354547 C5AR1P21730 350 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 FCARP24071 287 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 GDI1P31150 447 aa18.26■□□□□ 0.51
COL13A1-201ENST00000354547 GCGRP47871 477 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms