RNA–Protein interactions for RNA: ENST00000354504.7

VPS54-202, Transcript of VPS54, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS54, Length 3,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-202ENST00000354504 PRSS48Q7RTY5 328 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PPP1R32Q7Z5V6 425 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 DDIASQ8IXT1 998 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 OR4N4Q8N0Y3 316 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CARFQ8N187 725 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ELMOD1Q8N336 334 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LRRC75AQ8NAA5 344 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 MFSD9Q8NBP5 474 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CNIH3Q8TBE1 160 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ASZ1Q8WWH4 475 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 HDAC2Q92769 488 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 FAM120BQ96EK7 910 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 VMP1Q96GC9 406 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 MARS2Q96GW9 593 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 MACROD1Q9BQ69 325 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TUBA1CQ9BQE3 449 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 MESP1Q9BRJ9 268 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 APOOQ9BUR5 198 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 DGCR6LQ9BY27 220 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TPT1P8Q9HAU6 139 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LANCL2Q9NS86 450 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 SMPD3Q9NY59 655 aaPredicted RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 PTTG2Q9NZH5 202 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 SPATA7Q9P0W8 599 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 C5AR2Q9P296 337 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PDP2Q9P2J9 529 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 DNAJB9Q9UBS3 223 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PSORS1C1Q9UIG5 152 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 FIS1Q9Y3D6 152 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 DSCAML1Q8TD84 2053 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TANC2Q9HCD6 1990 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LOC100130705A0A1B0GUX0 176 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TRBC2A0A5B9 178 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 OR52A4PA6NMU1 304 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RAB27BO00194 218 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RTCAO00442 366 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 CDC42EP2O14613 210 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RGS14O43566 566 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 INMTO95050 263 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 DIRAS1O95057 198 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 C6orf47O95873 294 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LGI1O95970 557 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LALBAP00709 142 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 FTH1P02794 183 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ANXA6P08133 673 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ACP2P11117 423 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CYP2A6P11509 494 aaPredicted RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 SLC2A4P14672 509 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TGM1P22735 817 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ATP5A1P25705 553 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 ITPKBP27987 946 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ARL1P40616 181 aaPredicted RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 ACAA2P42765 397 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 MTHFRP42898 656 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 CRYBB2P43320 205 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RPL5P46777 297 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 GSSP48637 474 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ALDH9A1P49189 494 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 GTF2A1P52655 376 aaPredicted RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 STARD6P59095 220 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TRA2BP62995 288 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 HSPA14Q0VDF9 509 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ABRQ12979 859 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 FADDQ13158 208 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 NAE1Q13564 534 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 MAPRE2Q15555 327 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LRIT3Q3SXY7 679 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ZBED5Q49AG3 693 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 SLC48A1Q6P1K1 146 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PGBD2Q6P3X8 592 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ZNF773Q6PK81 442 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 Q6ZNX1 250 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 LCNL1Q6ZST4 164 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 COX15Q7KZN9 410 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TRILQ7L0X0 811 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TAS2R42Q7RTR8 314 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 R3HCC1LQ7Z5L2 792 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 BIVMQ86UB2 503 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 DNAJC22Q8N4W6 341 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TBC1D19Q8N5T2 526 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ZNF615Q8N8J6 731 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 OR2T12Q8NG77 320 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 OR7G2Q8NG99 324 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 TMEM171Q8WVE6 324 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PATE1Q8WXA2 126 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 SMG7Q92540 1137 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 ELMO1Q92556 727 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 C12orf43Q96C57 262 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 SLC47A1Q96FL8 570 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 OR52E6Q96RD3 313 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 F2RL3Q96RI0 385 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 GFI1Q99684 422 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 KCTD14Q9BQ13 255 aaPredicted RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 UGT2B28Q9BY64 529 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 YTHDF1Q9BYJ9 559 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 TRIM15Q9C019 465 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 PPIL3Q9H2H8 161 aaKnown RBP2.14□□□□□ -2.07
VPS54-202ENST00000354504 OR51B5Q9H339 312 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 ZCCHC4Q9H5U6 513 aa2.14□□□□□ -2.07
VPS54-202ENST00000354504 RNF167Q9H6Y7 350 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms