RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ATOH1Q92858 354 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-202ENST00000351691 MS4A3Q96HJ5 214 aa14.03□□□□□ -0.16
TRAF3-202ENST00000351691 SARGQ9BW04 601 aa14.03□□□□□ -0.16
TRAF3-202ENST00000351691 ATG10Q9H0Y0 220 aa14.03□□□□□ -0.16
TRAF3-202ENST00000351691 SUV39H2Q9H5I1 410 aa14.03□□□□□ -0.16
TRAF3-202ENST00000351691 NPDC1Q9NQX5 325 aaPredicted RBP14.03□□□□□ -0.16
TRAF3-202ENST00000351691 A4GNTQ9UNA3 340 aa14.03□□□□□ -0.16
TRAF3-202ENST00000351691 KCNK7Q9Y2U2 307 aa14.03□□□□□ -0.16
TRAF3-202ENST00000351691 CCDC88CQ9P219 2028 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 A0A1W2PRB8 838 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 NPIPB15A6NHN6 443 aaPredicted RBP14.02□□□□□ -0.16
TRAF3-202ENST00000351691 DNASE2O00115 360 aaPredicted RBP14.02□□□□□ -0.16
TRAF3-202ENST00000351691 RNF13O43567 381 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 PEX14O75381 377 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 UBL3O95164 117 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 HRGP04196 525 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 GIPP09681 153 aaPredicted RBP14.02□□□□□ -0.16
TRAF3-202ENST00000351691 SRP9P49458 86 aaKnown RBP14.02□□□□□ -0.16
TRAF3-202ENST00000351691 SELENOPP49908 381 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 ERVK-21P61565 698 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 FOXD4Q12950 439 aaPredicted RBP14.02□□□□□ -0.16
TRAF3-202ENST00000351691 TXNDC8Q6A555 127 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 SLC27A4Q6P1M0 643 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 SAMD12Q8N8I0 201 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 HAVCR2Q8TDQ0 301 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 SCLYQ96I15 445 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 USB1Q9BQ65 265 aaKnown RBP14.02□□□□□ -0.16
TRAF3-202ENST00000351691 MVB12BQ9H7P6 319 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.02□□□□□ -0.16
TRAF3-202ENST00000351691 HPF1Q9NWY4 346 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 RPS6KB2Q9UBS0 482 aa14.02□□□□□ -0.16
TRAF3-202ENST00000351691 L7N2F9 121 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 CTDSPLO15194 276 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 GMDSO60547 372 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 SELENOFO60613 162 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 FZD7O75084 574 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 SYPP08247 313 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 CCL5P13501 91 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 B4GALNT1Q00973 533 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 TRAM1Q15629 374 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 SPOUT1Q5T280 376 aaKnown RBP14.02□□□□□ -0.17
TRAF3-202ENST00000351691 METTL11BQ5VVY1 283 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 SMARCD3Q6STE5 483 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.02□□□□□ -0.17
TRAF3-202ENST00000351691 DEF8Q6ZN54 512 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 TSPAN33Q86UF1 283 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 LHFPL3Q86UP9 236 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 MCATQ8IVS2 390 aaKnown RBP14.02□□□□□ -0.17
TRAF3-202ENST00000351691 OR5AK3PQ8NH89 298 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 NEURL3Q96EH8 262 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 LMLNQ96KR4 655 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 CXorf58Q96LI9 332 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 MS4A7Q9GZW8 240 aaPredicted RBP14.02□□□□□ -0.17
TRAF3-202ENST00000351691 PTGFRNQ9P2B2 879 aa14.02□□□□□ -0.17
TRAF3-202ENST00000351691 ZFR2Q9UPR6 939 aaKnown RBP14.02□□□□□ -0.17
TRAF3-202ENST00000351691 FOXE1O00358 373 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-202ENST00000351691 PDCD5O14737 125 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 APOL3O95236 402 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 CXCL2P19875 107 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 GKP32189 559 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 RECQLP46063 649 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-202ENST00000351691 SLC6A11P48066 632 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 RAP2BP61225 183 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 FAM69AQ5T7M9 428 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 ZNF322Q6U7Q0 402 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-202ENST00000351691 GPR156Q8NFN8 814 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 OR4K5Q8NGD3 323 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 TEX47Q8TBZ9 253 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 C16orf78Q8WTQ4 265 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 SLC38A5Q8WUX1 472 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 SKA2Q8WVK7 121 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-202ENST00000351691 SPRYD4Q8WW59 207 aaPredicted RBP14.01□□□□□ -0.17
TRAF3-202ENST00000351691 HERVK_113Q902F9 699 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 SIPA1Q96FS4 1042 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 C12orf66Q96MD2 445 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 ZNF607Q96SK3 696 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 FAIM2Q9BWQ8 316 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 C1QTNF6Q9BXI9 259 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 SAP130Q9H0E3 1048 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 NANSQ9NR45 359 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 WBP1LQ9NX94 342 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 CFAP97Q9P2B7 532 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 HS3ST2Q9Y278 367 aa14.01□□□□□ -0.17
TRAF3-202ENST00000351691 HELZP42694 1942 aaKnown RBP14.01□□□□□ -0.17
TRAF3-202ENST00000351691 A0A1B0GUH1 482 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 SGTAO43765 313 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 HYAL3O43820 417 aaPredicted RBP14□□□□□ -0.17
TRAF3-202ENST00000351691 UBXN7O94888 489 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 POP4O95707 220 aaKnown RBP14□□□□□ -0.17
TRAF3-202ENST00000351691 LPLP06858 475 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 H2AFB1P0C5Y9 115 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 CD70P32970 193 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 SOAT1P35610 550 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 CD96P40200 585 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 CDH11P55287 796 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 KLF9Q13886 244 aaPredicted RBP14□□□□□ -0.17
TRAF3-202ENST00000351691 ATP13A5Q4VNC0 1218 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 PABPC1L2AQ5JQF8 200 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 AADACL4Q5VUY2 407 aa14□□□□□ -0.17
TRAF3-202ENST00000351691 SLC30A6Q6NXT4 461 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms