RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CSF2RBP32927 897 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 GABRA3P34903 492 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 CNR2P34972 360 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 SLC15A1P46059 708 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 STT3AP46977 705 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 OMPP47874 163 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 AVPR1BP47901 424 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 RGS8P57771 180 aaPredicted RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 OR1D5P58170 312 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 POU6F2P78424 691 aaPredicted RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 GPLD1P80108 840 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 HSD11B2P80365 405 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 LSM11P83369 360 aaKnown RBP eCLIP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ZXDAP98168 799 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 EFNB1P98172 346 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 MAT1AQ00266 395 aaKnown RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ROR2Q01974 943 aaKnown RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 PLAURQ03405 335 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ST3GAL3Q11203 375 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 BIKQ13323 160 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 IRF3Q14653 427 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 LARS2Q15031 903 aaKnown RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 MAPK14Q16539 360 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 DECR1Q16698 335 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 EIPR1Q53HC9 387 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 SLC25A30Q5SVS4 291 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 CCNJQ5T5M9 372 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 UBE2UQ5VVX9 321 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 GPR107Q5VW38 600 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 LYSMD4Q5XG99 296 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 PMS2CLQ68D20 193 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 WDR74Q6RFH5 385 aaPredicted RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ANKRD13BQ86YJ7 626 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 PLXDC1Q8IUK5 500 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 GALNT12Q8IXK2 581 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 SVOPQ8N4V2 548 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 COX18Q8N8Q8 333 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF540Q8NDQ6 660 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 PRSS33Q8NF86 280 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 GNPDA2Q8TDQ7 276 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 TRUB1Q8WWH5 349 aaKnown RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 PIK3R3Q92569 461 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 GGHQ92820 318 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 SLC38A4Q969I6 547 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 YIPF6Q96EC8 236 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 MVB12AQ96EY5 273 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 PEX11GQ96HA9 241 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 MPP4Q96JB8 637 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 COG8Q96MW5 612 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 VSTM2LQ96N03 204 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF578Q96N58 590 aaPredicted RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 MCHR1Q99705 422 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 GPA33Q99795 319 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 BCL7BQ9BQE9 202 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 PELOQ9BRX2 385 aaKnown RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 RHNO1Q9BSD3 238 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ALOXE3Q9BYJ1 711 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 NAA50Q9GZZ1 169 aaKnown RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 GPN2Q9H9Y4 310 aaPredicted RBP6.43□□□□□ -1.38
TRIM55-203ENST00000350034 FOLH1BQ9HBA9 442 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 SLC25A19Q9HC21 320 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ACOT13Q9NPJ3 140 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 LANCL2Q9NS86 450 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 CUTCQ9NTM9 273 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 SEMA4GQ9NTN9 838 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 FBXO34Q9NWN3 711 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 SOHLH2Q9NX45 425 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 MUTYHQ9UIF7 546 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 SLC13A4Q9UKG4 626 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 SLC6A14Q9UN76 642 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ZNF232Q9UNY5 417 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 MMACHCQ9Y4U1 282 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 ASPMQ8IZT6 3477 aa6.43□□□□□ -1.38
TRIM55-203ENST00000350034 IGKV3D-11A0A0A0MRZ8 115 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 LY6G6EA0A0G2JKS1 128 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 A0A1B0GTQ1 180 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CDHR4A6H8M9 788 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CLDN24A6NM45 220 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 AP3D1O14617 1153 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 TOX3O15405 576 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 FRS3O43559 492 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 DUX1O43812 170 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 KCNK2O95069 426 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 IGKV1D-16P01601 117 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CDK1P06493 297 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 IGFBP1P08833 259 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CCNYL3P0C7X3 344 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 PIPP12273 146 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 EPHA8P29322 1005 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 SSTR4P31391 388 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 IFNGR2P38484 337 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 PEX19P40855 299 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 MAP2K4P45985 399 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 IDH2P48735 452 aaKnown RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 ARRB1P49407 418 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-203ENST00000350034 TAS2R41P59536 307 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CDC42P60953 191 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 BTG2P78543 158 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 CDK5Q00535 292 aa6.42□□□□□ -1.38
TRIM55-203ENST00000350034 STX4Q12846 297 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms