RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 KRT33BQ14525 404 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 ESPNLQ6ZVH7 1005 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 PRSS45Q7RTY3 260 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 LRRC28Q86X40 367 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 RGL4Q8IZJ4 473 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 ARMC10Q8N2F6 343 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 AVL9Q8NBF6 648 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 VOPP1Q96AW1 172 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 PANX1Q96RD7 426 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 AARSD1Q9BTE6 412 aaKnown RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 DOHHQ9BU89 302 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 C1QTNF3Q9BXJ4 246 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 TMPRSS13Q9BYE2 586 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 DUX4Q9UBX2 424 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 TRPM7Q96QT4 1865 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 IGKV6-21A0A0C4DH24 114 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 RGS14O43566 566 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 C1SP09871 688 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 PIRTP0C851 137 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 NR2F6P10588 404 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 CELP19835 753 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 ANXA7P20073 488 aaKnown RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 TPBGQ13641 420 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 CCL14Q16627 93 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 C2orf68Q2NKX9 166 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 GPRC6AQ5T6X5 926 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 TMEM71Q6P5X7 295 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 CASP12Q6UXS9 341 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 ETV3LQ6ZN32 361 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 ARMCX2Q7L311 632 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 SLITRK4Q8IW52 837 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 SKA3Q8IX90 412 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 KLHDC8BQ8IXV7 354 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 CCDC116Q8IYX3 515 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 CCDC54Q8NEL0 328 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 OR52B4Q8NGK2 314 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 OR5M1Q8NGP8 315 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 TCTEX1D2Q8WW35 142 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 ACOT11Q8WXI4 607 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 WNT8BQ93098 351 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 SMAD5Q99717 465 aaKnown RBP10.01□□□□□ -0.81
CAPN3-203ENST00000349748 PIGQQ9BRB3 760 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 SUCNR1Q9BXA5 334 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 IPPKQ9H8X2 491 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 ATP13A1Q9HD20 1204 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 ASF1BQ9NVP2 202 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 OR12D3Q9UGF7 316 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 NINQ8N4C6 2090 aa10.01□□□□□ -0.81
CAPN3-203ENST00000349748 DPM1O60762 260 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 RAB36O95755 333 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 MBP02144 154 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 THP07101 528 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 BDKRB2P30411 391 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 CCR1P32246 355 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 AKR1C3P42330 323 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 RBP2P50120 134 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 UBE2MP61081 183 aaKnown RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 BOP1Q14137 746 aaKnown RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 OR52W1Q6IF63 320 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 MOB3CQ70IA8 216 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 REC114Q7Z4M0 266 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 SLC44A3Q8N4M1 653 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 POMGNT2Q8NAT1 580 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 OR51Q1Q8NH59 317 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 C14orf79Q96F83 325 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 UBL7Q96S82 380 aaPredicted RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 GINS4Q9BRT9 223 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 EDEM2Q9BV94 578 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 NMNAT1Q9HAN9 279 aaPredicted RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 TVP23BQ9NYZ1 205 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 ZNF629Q9UEG4 869 aaPredicted RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 ST3GAL5Q9UNP4 418 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 RASD1Q9Y272 281 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 ARL5AQ9Y689 179 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 TRDV1A0A1B0GX56 115 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 FPGTO14772 594 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 GCM2O75603 506 aaPredicted RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 RBBP9O75884 186 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 ZNF14P17017 642 aaPredicted RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 MPGP29372 298 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 RBMS1P29558 406 aaKnown RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 GDF5P43026 501 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 RFX3P48380 749 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 RAG2P55895 527 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 H2BFSP57053 126 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 OR10A3P58181 314 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 RPS14P62263 151 aaKnown RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 PLA2G7Q13093 441 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 C17orf99Q6UX52 265 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 LHFPL3Q86UP9 236 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 IZUMO1Q8IYV9 350 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 CLECL1Q8IZS7 167 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 ARIH2OSQ8N7S6 290 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 ZNF511Q8NB15 262 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 SIDT2Q8NBJ9 832 aaKnown RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 TMIEQ8NEW7 156 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 EEF1AKMT1Q8WVE0 214 aa10□□□□□ -0.81
CAPN3-203ENST00000349748 GCDHQ92947 438 aaPredicted RBP10□□□□□ -0.81
CAPN3-203ENST00000349748 CPNE2Q96FN4 548 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms