RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 HMGA1P17096 107 aaKnown RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 CDK10Q15131 360 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 SYPL1Q16563 259 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 LRIT3Q3SXY7 679 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 FKBP10Q96AY3 582 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 NXPE2Q96DL1 559 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 C19orf25Q9UFG5 118 aaPredicted RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 SLC7A7Q9UM01 511 aa13.89□□□□□ -0.19
NUP50-201ENST00000347635 DIMT1Q9UNQ2 313 aaKnown RBP13.89□□□□□ -0.19
NUP50-201ENST00000347635 S100A9P06702 114 aaKnown RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 ELAVL4P26378 380 aaKnown RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 IL12BP29460 328 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 HLA-FP30511 346 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 NAA10P41227 235 aaPredicted RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 FLYWCH1Q4VC44 716 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 C3orf38Q5JPI3 329 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 KLHL24Q6TFL4 600 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 LIPIQ6XZB0 460 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 FAM83HQ6ZRV2 1179 aaPredicted RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 GDPD3Q7L5L3 318 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 PAQR7Q86WK9 346 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 DGAT2Q96PD7 388 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 STRADBQ9C0K7 418 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 PCP4L1A6NKN8 68 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 LRRTM2O43300 516 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 OR7A10O76100 309 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 MASP1P48740 699 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 NRG3P56975 720 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 TEKQ02763 1124 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 SOWAHCQ53LP3 525 aaPredicted RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 SLC22A10Q63ZE4 541 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 NLRP8Q86W28 1048 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 CALHM3Q86XJ0 350 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 PLPP6Q8IY26 295 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 FBXO15Q8NCQ5 510 aaPredicted RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 HSPA12BQ96MM6 686 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 CSF3RQ99062 836 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 CRISPLD2Q9H0B8 497 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 ACTL8Q9H568 366 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 MTHFD2LQ9H903 347 aaPredicted RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 IFT46Q9NQC8 304 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 FRS3O43559 492 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 HOXC8P31273 242 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 UQCRC1P31930 480 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 RPS19P39019 145 aaKnown RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 CAV3P56539 151 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 TMEM69Q5SWH9 247 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 PIP5KL1Q5T9C9 394 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 SLC16A12Q6ZSM3 486 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 UBQLNLQ8IYU4 475 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 WFDC5Q8TCV5 224 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 DTD2Q96FN9 168 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 HS6ST2Q96MM7 605 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 CTRCQ99895 268 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 POLDIP3Q9BY77 421 aaKnown RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 NUDT15Q9NV35 164 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 HCN3Q9P1Z3 774 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 PCDHGA4Q9Y5G9 962 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 TRBV2A0A0J9YWF9 115 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 DUX1O43812 170 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 PIPP12273 146 aaPredicted RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 XCR1P46094 333 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 SLC6A12P48065 614 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 SNRPGP62308 76 aaKnown RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 DEFA5Q01523 94 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 ARHGAP11AQ6P4F7 1023 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 METAP1DQ6UB28 335 aaPredicted RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 COMMD7Q86VX2 200 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 ZNF582Q96NG8 517 aaPredicted RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 C11orf54Q9H0W9 315 aaPredicted RBP13.88□□□□□ -0.19
NUP50-201ENST00000347635 Q9N2J8 555 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 MGAT4CQ9UBM8 478 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 ALG5Q9Y673 324 aa13.88□□□□□ -0.19
NUP50-201ENST00000347635 TRAPPC13A5PLN9 417 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 SLCO2B1O94956 709 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 AHCYP23526 432 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 MAN2A2P49641 1150 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 KIF18BQ86Y91 864 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 PITX2Q99697 317 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 TREX2Q9BQ50 279 aaPredicted RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 EGLN3Q9H6Z9 239 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 DDX31Q9H8H2 851 aaKnown RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 GABRPO00591 440 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 HMGN2P05204 90 aaKnown RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 DBIP07108 87 aaKnown RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 ZDHHC11BP0C7U3 371 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 RPS15AP62244 130 aaKnown RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 SLX4IPQ5VYV7 408 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 RASGRP3Q8IV61 690 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 ZNF527Q8NB42 609 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 NKD1Q969G9 470 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 CNN2Q99439 309 aaKnown RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 A4GALTQ9NPC4 353 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 CD93Q9NPY3 652 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.87□□□□□ -0.19
NUP50-201ENST00000347635 CLEC2DQ9UHP7 191 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 KRT33AO76009 404 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 GABRA3P34903 492 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 PSPHP78330 225 aa13.87□□□□□ -0.19
NUP50-201ENST00000347635 PUM1Q14671 1186 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms