RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MED27Q6P2C8 311 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 CEACAM19Q7Z692 300 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 SLITRK4Q8IW52 837 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 UPF1Q92900 1129 aaKnown RBP eCLIP14.4□□□□□ -0.13e-9■■■■■ 28.3
LMNA-201ENST00000347559 ORAI3Q9BRQ5 295 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 FXYD6Q9H0Q3 95 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 ZNF768Q9H5H4 540 aaKnown RBP14.4□□□□□ -0.1
LMNA-201ENST00000347559 EVA1AQ9H8M9 152 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 ASB6Q9NWX5 421 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 H2AFY2Q9P0M6 372 aaPredicted RBP14.4□□□□□ -0.1
LMNA-201ENST00000347559 ZC3H12DA2A288 527 aaKnown RBP14.4□□□□□ -0.1
LMNA-201ENST00000347559 AIPO00170 330 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 SOCS6O14544 535 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 ZNF197O14709 1029 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 SLC2A10O95528 541 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 FGF2P09038 288 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 TBXA2RP21731 343 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 MAOBP27338 520 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 KCNJ5P48544 419 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 MANFP55145 182 aaKnown RBP14.4□□□□□ -0.1
LMNA-201ENST00000347559 SLC25A30Q5SVS4 291 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 ZNF322Q6U7Q0 402 aaPredicted RBP14.4□□□□□ -0.1
LMNA-201ENST00000347559 NHLRC1Q6VVB1 395 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 GPR142Q7Z601 462 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 ZFPM2Q8WW38 1151 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 WBP2Q969T9 261 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 SLC38A3Q99624 504 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 MRPS18AQ9NVS2 196 aaKnown RBP14.4□□□□□ -0.1
LMNA-201ENST00000347559 TRPC4Q9UBN4 977 aa14.4□□□□□ -0.1
LMNA-201ENST00000347559 TMEM202A6NGA9 273 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 UGDHO60701 494 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 TBL1XO60907 577 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 UBXN7O94888 489 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 UQCRC2P22695 453 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 HSD3B2P26439 372 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 BUD31P41223 144 aaPredicted RBP14.39□□□□□ -0.11
LMNA-201ENST00000347559 RAD52P43351 418 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 PREPP48147 710 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 EFNB1P98172 346 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 HECTD3Q5T447 861 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 PDZD9Q8IXQ8 264 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 LILRA3Q8N6C8 439 aaPredicted RBP14.39□□□□□ -0.11
LMNA-201ENST00000347559 RELL2Q8NC24 303 aaPredicted RBP14.39□□□□□ -0.11
LMNA-201ENST00000347559 FGF11Q92914 225 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 OR51I1Q9H343 314 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 TDP1Q9NUW8 608 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 NFKBIL1Q9UBC1 381 aaPredicted RBP14.39□□□□□ -0.11
LMNA-201ENST00000347559 RCE1Q9Y256 329 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 PLSCR5A0PG75 271 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 MCRIP1C9JLW8 97 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 LRRN3E7EW58 273 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 H7C2Y5 167 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 GNSP15586 552 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 BOLLQ8N9W6 283 aaKnown RBP14.39□□□□□ -0.11
LMNA-201ENST00000347559 OR6T1Q8NGN1 323 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 OR51Q1Q8NH59 317 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 SCARB1Q8WTV0 552 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 FAM46AQ96IP4 442 aaKnown RBP14.39□□□□□ -0.11
LMNA-201ENST00000347559 ZNF607Q96SK3 696 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 LRRN3Q9H3W5 708 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 ACTR10Q9NZ32 417 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 STOX2Q9P2F5 926 aaPredicted RBP14.39□□□□□ -0.11
LMNA-201ENST00000347559 FAM170BA6NMN3 283 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 SDC3O75056 442 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 SPDEFO95238 335 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 UGT2B7P16662 529 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 CCND3P30281 292 aaPredicted RBP14.39□□□□□ -0.11
LMNA-201ENST00000347559 ACVR1BP36896 505 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 GDNFP39905 211 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 SLBPQ14493 270 aaKnown RBP eCLIP14.39□□□□□ -0.11
LMNA-201ENST00000347559 NDUFA9Q16795 377 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 CRTC1Q6UUV9 634 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 OR5D16Q8NGK9 328 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 FANK1Q8TC84 345 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 ZDHHC1Q8WTX9 485 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 ASZ1Q8WWH4 475 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 RFKQ969G6 155 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 CXorf40BQ96DE9 158 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 SPATA5L1Q9BVQ7 753 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 FAIM2Q9BWQ8 316 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 ABCG4Q9H172 646 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 NTMQ9P121 344 aa14.39□□□□□ -0.11
LMNA-201ENST00000347559 ING1Q9UK53 422 aaPredicted RBP14.39□□□□□ -0.11
LMNA-201ENST00000347559 FRS3O43559 492 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 TRIM23P36406 574 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 LGALS3BPQ08380 585 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 SCRN3Q0VDG4 424 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 SPOUT1Q5T280 376 aaKnown RBP14.38□□□□□ -0.11
LMNA-201ENST00000347559 PDSS1Q5T2R2 415 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 FAAP20Q6NZ36 180 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 SIRT6Q8N6T7 355 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 TREX2Q9BQ50 279 aaPredicted RBP14.38□□□□□ -0.11
LMNA-201ENST00000347559 ACTR6Q9GZN1 396 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 TAAR2Q9P1P5 351 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 NPTNQ9Y639 398 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 HELZP42694 1942 aaKnown RBP14.38□□□□□ -0.11
LMNA-201ENST00000347559 A0A1W2PRQ8 180 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 AGAP14A8MT82 685 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 SUSD5O60279 629 aa14.38□□□□□ -0.11
LMNA-201ENST00000347559 GLAP06280 429 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms