RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 MUC13Q9H3R2 512 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 GPC6Q9Y625 555 aaPredicted RBP17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 ACACAQ13085 2346 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 A6NL46 340 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 NPIPB9F8W1W9 429 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 UGT2B11O75310 529 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 SERPINA1P01009 418 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 ALPPP05187 535 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 CYP4B1P13584 511 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 SOX3P41225 446 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 DMTNQ08495 405 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 RAPSNQ13702 412 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 FLOT2Q14254 428 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 CRB2Q5IJ48 1285 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 ZNF468Q5VIY5 522 aaPredicted RBP17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 AP1ARQ63HQ0 302 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 JMJD6Q6NYC1 403 aaPredicted RBP17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 CCDC81Q6ZN84 652 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 TAGAPQ8N103 731 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 ZNF619Q8N2I2 560 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 FAM86B1Q8N7N1 296 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 KDF1Q8NAX2 398 aaPredicted RBP17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 CLEC1AQ8NC01 280 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 DIO2Q92813 273 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 NSMCE2Q96MF7 247 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 ING2Q9H160 280 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 ZBTB20Q9HC78 741 aaPredicted RBP17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 CPNE5Q9HCH3 593 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 CALML5Q9NZT1 146 aa17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 URB1O60287 2271 aaKnown RBP17.49■□□□□ 0.39
CHMP4A-201ENST00000347519 EML6Q6ZMW3 1958 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 TPST1O60507 370 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 PPM1BO75688 479 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 OR6B1O95007 311 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 MFN2O95140 757 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 GUSBP08236 651 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 RPS4Y1P22090 263 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 RRADP55042 308 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 FBXW4P57775 412 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 HPCAP84074 193 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 GNA13Q14344 377 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 GRAMD1BQ3KR37 738 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 FLYWCH1Q4VC44 716 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 CYBRD1Q53TN4 286 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 INTS11Q5TA45 600 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 PATL1Q86TB9 770 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 COMTD1Q86VU5 262 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 VRK2Q86Y07 508 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 GALNT16Q8N428 558 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 SLC5A8Q8N695 610 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 SMYD1Q8NB12 490 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 OR4C3Q8NH37 302 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 SLC22A8Q8TCC7 542 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 HGDQ93099 445 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 G6PC3Q9BUM1 346 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 MTHFD2LQ9H903 347 aaPredicted RBP17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 POLE3Q9NRF9 147 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 DCAF13Q9NV06 445 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 YARS2Q9Y2Z4 477 aaKnown RBP17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 CHST2Q9Y4C5 530 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 ZNF451Q9Y4E5 1061 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 V9GYQ6 96 aa17.48■□□□□ 0.39
CHMP4A-201ENST00000347519 CLDN24A6NM45 220 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 RRP8O43159 456 aaKnown RBP17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 ICOSLGO75144 302 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 UGT2B17O75795 530 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 UTS2O95399 124 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 EPPINO95925 133 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 FBXO45P0C2W1 286 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 ETS2P15036 469 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 CD247P20963 164 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 ATP6V1C1P21283 382 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 IL12BP29460 328 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 DCTP40126 519 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 NRG3P56975 720 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 SOX8P57073 446 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 ZNF791Q3KP31 576 aaPredicted RBP17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 GLIPR1L2Q4G1C9 344 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 ACER2Q5QJU3 275 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 ENPP6Q6UWR7 440 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 APOOLQ6UXV4 268 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 GPR32P1Q8NGA4 272 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 OR5M3Q8NGP4 307 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 PCDHGA10Q9Y5H3 936 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 KCNMB2Q9Y691 235 aa17.47■□□□□ 0.39
CHMP4A-201ENST00000347519 OR6C70A6NIJ9 312 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 AGAP5A6NIR3 686 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 ADAM10O14672 748 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 ABCB7O75027 752 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 GMNNO75496 209 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 SSR4P51571 173 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 CCL11P51671 97 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 PNLIPRP2P54317 469 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 ATP12AP54707 1039 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 ACTR3P61158 418 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 MEP1AQ16819 746 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 DUSP7Q16829 419 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 CBLL1Q75N03 491 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 VTCN1Q7Z7D3 282 aa17.46■□□□□ 0.39
CHMP4A-201ENST00000347519 SPATA24Q86W54 205 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms