RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CSMD1Q96PZ7 3565 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 MYO1GB0I1T2 1018 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 H3BNX3 289 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 BAG2O95816 211 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 DRD2P14416 443 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 C2orf80Q0P641 193 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 KRTCAP3Q53RY4 240 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 MAMDC2Q7Z304 686 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-201ENST00000346213 GHDCQ8N2G8 530 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 POGLUT1Q8NBL1 392 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 FAM98AQ8NCA5 519 aaKnown RBP14.73□□□□□ -0.05
RAB5C-201ENST00000346213 OR7G1Q8NGA0 311 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 OR4N2Q8NGD1 307 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 SLC22A8Q8TCC7 542 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 ZNF675Q8TD23 568 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 CIDECQ96AQ7 238 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-201ENST00000346213 VSTM2LQ96N03 204 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 DMRTA2Q96SC8 542 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 FAM173AQ9BQD7 235 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 FAIM2Q9BWQ8 316 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 PCDHAC1Q9H158 963 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 GLIPR2Q9H4G4 154 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 ZNF703Q9H7S9 590 aaPredicted RBP14.73□□□□□ -0.05
RAB5C-201ENST00000346213 NMRK1Q9NWW6 199 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 SPRR3Q9UBC9 169 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 LRRC42Q9Y546 428 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 NPFFR2Q9Y5X5 522 aa14.73□□□□□ -0.05
RAB5C-201ENST00000346213 DCHS2Q6V1P9 2916 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 C2orf72A6NCS6 295 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 KDM4EB2RXH2 506 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-201ENST00000346213 TRIM3O75382 744 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-201ENST00000346213 PGRP06401 933 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 ABCB1P08183 1280 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-201ENST00000346213 EFNA1P20827 205 aaPredicted RBP14.72□□□□□ -0.05
RAB5C-201ENST00000346213 EEFSECP57772 596 aaKnown RBP14.72□□□□□ -0.05
RAB5C-201ENST00000346213 BNIP2Q12982 314 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 FAM174BQ3ZCQ3 159 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 SPANXN4Q5MJ08 99 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 C6orf10Q5SRN2 563 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 NANOGP8Q6NSW7 305 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 CD163Q86VB7 1156 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 SLC15A4Q8N697 577 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 SPPL2AQ8TCT8 520 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 TP53INP1Q96A56 240 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 TESCQ96BS2 214 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 SGCZQ96LD1 299 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 NANOGQ9H9S0 305 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 SLAMF8Q9P0V8 285 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 MEMO1Q9Y316 297 aa14.72□□□□□ -0.05
RAB5C-201ENST00000346213 DIDO1Q9BTC0 2240 aaKnown RBP14.72□□□□□ -0.05
RAB5C-201ENST00000346213 NCOA6Q14686 2063 aaPredicted RBP14.71□□□□□ -0.05
RAB5C-201ENST00000346213 DYRK3O43781 588 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 UGT2B11O75310 529 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 GUCY1B2O75343 617 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 STAMBPO95630 424 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 C8BP07358 591 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 CT45A8P0DMV1 189 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 CT45A9P0DMV2 189 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 MC3RP41968 323 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 HYAL4Q2M3T9 481 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 CT45A2Q5DJT8 189 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 SLC22A10Q63ZE4 541 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 RIMKLAQ8IXN7 391 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 KRTCAP2Q8N6L1 136 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 GTF2H4Q92759 462 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 DUS3LQ96G46 650 aaKnown RBP14.71□□□□□ -0.05
RAB5C-201ENST00000346213 MAGED4Q96JG8 741 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 TSSK3Q96PN8 268 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 CGREF1Q99674 301 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 MUC13Q9H3R2 512 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 GALNT9Q9HCQ5 603 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 ZNF780BQ9Y6R6 833 aa14.71□□□□□ -0.05
RAB5C-201ENST00000346213 TEX15Q9BXT5 2789 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 A0A1B0GUH1 482 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 C19orf84I3L1E1 186 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 AKAP10O43572 662 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 KCNH1O95259 989 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 IGHG3P01860 377 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 P04436 131 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 DCTP40126 519 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 C21orf58P58505 322 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 MRPS22P82650 360 aaKnown RBP14.71□□□□□ -0.06
RAB5C-201ENST00000346213 PLGLB1Q02325 96 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 TMEM107Q6UX40 140 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 MSANTD1Q6ZTZ1 278 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 ZNF551Q7Z340 670 aaPredicted RBP14.71□□□□□ -0.06
RAB5C-201ENST00000346213 SPATA24Q86W54 205 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 DHFR2Q86XF0 187 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 FAM57AQ8TBR7 257 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 OMA1Q96E52 524 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 AMDHD1Q96NU7 426 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 SLC6A15Q9H2J7 730 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 FOLH1BQ9HBA9 442 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 PNPLA3Q9NST1 481 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 FLRT3Q9NZU0 649 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 C6orf203Q9P0P8 240 aaPredicted RBP14.71□□□□□ -0.06
RAB5C-201ENST00000346213 MAPRE3Q9UPY8 281 aa14.71□□□□□ -0.06
RAB5C-201ENST00000346213 GPR55Q9Y2T6 319 aaPredicted RBP14.71□□□□□ -0.06
RAB5C-201ENST00000346213 CSMD2Q7Z408 3487 aa14.7□□□□□ -0.06
RAB5C-201ENST00000346213 ZNF407Q9C0G0 2248 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms