RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SLC28A3Q9HAS3 691 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 STARD5Q9NSY2 213 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 TXNL4BQ9NX01 149 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 AGRPO00253 132 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 GKN3PP0CG01 181 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 NDUFV2P19404 249 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 RFX3P48380 749 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 ARFIP1P53367 373 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 GAS1P54826 345 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 WNT4P56705 351 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 SRP54P61011 504 aaKnown RBP13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 ALG11Q2TAA5 492 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 HSDL2Q6YN16 418 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 RASSF6Q6ZTQ3 369 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 LAPTM4BQ86VI4 370 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 PEX5LQ8IYB4 626 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 SYT14Q8NB59 555 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 FLCNQ8NFG4 579 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 BBS1Q8NFJ9 593 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 NT5CQ8TCD5 201 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 ACOT11Q8WXI4 607 aaPredicted RBP13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 C1GALT1C1Q96EU7 318 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 CPNE5Q9HCH3 593 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 WDR70Q9NW82 654 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 PHF11Q9UIL8 331 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 DAPP1Q9UN19 280 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 CSNK1G3Q9Y6M4 447 aa13.9□□□□□ -0.18
VIPAS39-202ENST00000343765 DUXAA6NLW8 204 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 PRG2P13727 222 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 FUT1P19526 365 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 HNRNPA2B1P22626 353 aaKnown RBP13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 TLX1P31314 330 aaPredicted RBP13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 SOX18P35713 384 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 CDH11P55287 796 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 RUNX1T1Q06455 604 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 HNRNPA0Q13151 305 aaKnown RBP13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 KIR2DS3Q14952 304 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 B3GLCTQ6Y288 498 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 MRPL38Q96DV4 380 aaKnown RBP13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 SERINC2Q96SA4 455 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 TRIM45Q9H8W5 580 aaPredicted RBP13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 FBXO34Q9NWN3 711 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 CLEC1BQ9P126 229 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 UGT2A1Q9Y4X1 527 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 CDC42EP2O14613 210 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 SNPHO15079 494 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 IMPDH2P12268 514 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 NT5EP21589 574 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 CDC20Q12834 499 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 MAPK14Q16539 360 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 C3orf38Q5JPI3 329 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 SLC25A30Q5SVS4 291 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 HEPHL1Q6MZM0 1159 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 CCBE1Q6UXH8 406 aaPredicted RBP13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 GDPD3Q7L5L3 318 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 TMEM52Q8NDY8 209 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 RPLP0P6Q8NHW5 317 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 FAM3CQ92520 227 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 TCEAL2Q9H3H9 227 aaPredicted RBP13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 ZNF232Q9UNY5 417 aa13.89□□□□□ -0.19
VIPAS39-202ENST00000343765 FAM183AA6NL82 134 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 H0YGG7 62 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 CPMP14384 443 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 CPEP16870 476 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 LSSP48449 732 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 TPMTP51580 245 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 ARF3P61204 181 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 PPP1CAP62136 330 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 SHC2P98077 582 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 RAB40BQ12829 278 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 EXOSC7Q15024 291 aaKnown RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 LARS2Q15031 903 aaKnown RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 MINDY4Q4G0A6 757 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 CRTC2Q53ET0 693 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 RBM12BQ8IXT5 1001 aaKnown RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 GJD3Q8N144 294 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 OR2L13Q8N349 312 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 CELF2-AS1Q8N7Q2 184 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 ASB15Q8WXK1 588 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 SAMD8Q96LT4 415 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 EVA1BQ9NVM1 165 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 PIAS3Q9Y6X2 628 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 A0A075B6Q4 140 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 PEX12O00623 359 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 FGF17O60258 216 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 PTTG1O95997 202 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 SPTBP11277 2137 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 CAV3P56539 151 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 FIGNL1Q6PIW4 674 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 TMPRSS11AQ6ZMR5 421 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 GDPGP1Q6ZNW5 385 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 Q6ZSR6 202 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 RERGQ96A58 199 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 NACC2Q96BF6 587 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 TM4SF19Q96DZ7 209 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 SDF2Q99470 211 aa13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 MTHFD2LQ9H903 347 aaPredicted RBP13.88□□□□□ -0.19
VIPAS39-202ENST00000343765 PAIP2BQ9ULR5 123 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms