RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 SLC29A3Q9BZD2 475 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ADAM7Q9H2U9 754 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 HIF1ANQ9NWT6 349 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 VPS29Q9UBQ0 182 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 NOX1Q9Y5S8 564 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 IGSF1Q8N6C5 1336 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 C17orf102A2RUQ5 167 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 CH25HO95992 272 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ARSBP15848 533 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 GABRA5P31644 462 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 Q1RN00 199 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 OR2T2Q6IF00 324 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 RNF130Q86XS8 419 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 BCL7CQ8WUZ0 217 aaPredicted RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 MIB2Q96AX9 1013 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 BRF2Q9HAW0 419 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 QSER1Q2KHR3 1735 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 A0A1W2PPV4 95 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 SYT7O43581 403 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 PCDH7O60245 1069 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 TBL1XO60907 577 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 MAS1P04201 325 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 BCHEP06276 602 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ACPPP15309 386 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 BCL6P41182 706 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 PER3P56645 1201 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ABHD18Q0P651 414 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 DUSP7Q16829 419 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 TSTD2Q5T7W7 516 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 SLC18B1Q6NT16 456 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 RPL22L1Q6P5R6 122 aaKnown RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 C6orf89Q6UWU4 347 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 LRR1Q96L50 414 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ARHGDIGQ99819 225 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 DPEP3Q9H4B8 488 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 PARD6AQ9NPB6 346 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 AGO1Q9UL18 857 aaKnown RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 C2orf72A6NCS6 295 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 LRIT2A6NDA9 550 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ECI2O75521 394 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 HPNP05981 417 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ITGAMP11215 1152 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 APEHP13798 732 aaKnown RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 VARS2Q5ST30 1063 aaKnown RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 FUT10Q6P4F1 479 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 TMEM88Q6PEY1 159 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 TMEM173Q86WV6 379 aaPredicted RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 OR8J1Q8NGP2 316 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ZNF461Q8TAF7 563 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 STT3BQ8TCJ2 826 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 DYRK2Q92630 601 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 PDCD1LG2Q9BQ51 273 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 SNRNP25Q9BV90 132 aaKnown RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 HMX1Q9NP08 348 aaPredicted RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 BABAM2Q9NXR7 383 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 NRCAMQ92823 1304 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 C3P01024 1663 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 BCORQ6W2J9 1755 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 A0A0U1RQJ8 604 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 PMM2O15305 246 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 EDNRBP24530 442 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 PTGER3P43115 390 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 BDKRB1P46663 353 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 NKPD1Q17RQ9 610 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 TOR2AQ5JU69 321 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 OR4N5Q8IXE1 308 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 FIBCD1Q8N539 461 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ACBD7Q8N6N7 88 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 CSPG4P5Q96PW8 444 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 NOX3Q9HBY0 568 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 KANSL3Q9P2N6 904 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 DPP7Q9UHL4 492 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 TIMM22Q9Y584 194 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ARL2-SNX15V9GYD0 113 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 OR5H15A6NDH6 313 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 OR5H14A6NHG9 310 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 OR5H1A6NKK0 313 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 MEIS3P2A8K0S8 358 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 MSTNO14793 375 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 FFAR2O15552 330 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 DNAJB13P59910 316 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 HNF4GQ14541 408 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 MSMO1Q15800 293 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ZNF630Q2M218 657 aaPredicted RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 FAM205BPQ63HN1 556 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 TMEM198Q66K66 360 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 CES5AQ6NT32 575 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 DRICH1Q6PGQ1 229 aaPredicted RBP5.87□□□□□ -1.47
VCAN-203ENST00000343200 ETV3LQ6ZN32 361 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 LINC00299Q6ZSB3 139 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 NDUFAF7Q7L592 441 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 FAM124AQ86V42 546 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 NUDT13Q86X67 352 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ZNF611Q8N823 705 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 RCBTB1Q8NDN9 531 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 SLC24A4Q8NFF2 622 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 REEP6Q96HR9 211 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 RADILQ96JH8 1075 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 ALG8Q9BVK2 526 aa5.87□□□□□ -1.47
VCAN-203ENST00000343200 NARFLQ9H6Q4 476 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms