RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 CHI3L1P36222 383 aaPredicted RBP17.52■□□□□ 0.4
SYNE4-202ENST00000340477 PTGDSP41222 190 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 MAP3K8P41279 467 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 TRPC1P48995 793 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 SMSP52788 366 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 FGD2Q7Z6J4 655 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 DOLPP1Q86YN1 238 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 CHERPQ8IWX8 916 aaKnown RBP17.52■□□□□ 0.4
SYNE4-202ENST00000340477 MIER2Q8N344 545 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 NEIL3Q8TAT5 605 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 OR52E6Q96RD3 313 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 SLC6A15Q9H2J7 730 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 UBQLN3Q9H347 655 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 SERHLQ9NQF3 203 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 BTNL2Q9UIR0 455 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 DKKL1Q9UK85 242 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 MEMO1Q9Y316 297 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 MYO7BQ6PIF6 2116 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 DUXAA6NLW8 204 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 E9PLN8 166 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 ZNHIT1O43257 154 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 ZG16O60844 167 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 KCNK2O95069 426 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 PGRP06401 933 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 UQCRC2P22695 453 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 AQP5P55064 265 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 WNT3P56703 355 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 STX5Q13190 355 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.51■□□□□ 0.39
SYNE4-202ENST00000340477 FNDC7Q5VTL7 733 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 TMEM211Q6ICI0 200 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 FIGNL1Q6PIW4 674 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 C6orf120Q7Z4R8 191 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 OR14L1PQ8NHC6 308 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 CDS1Q92903 461 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 OTUB1Q96FW1 271 aaPredicted RBP17.51■□□□□ 0.39
SYNE4-202ENST00000340477 CCDC120Q96HB5 630 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 PANX1Q96RD7 426 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 VKORC1Q9BQB6 163 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 CCDC28BQ9BUN5 200 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 RMND5AQ9H871 391 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 GPATCH2Q9NW75 528 aa17.51■□□□□ 0.39
SYNE4-202ENST00000340477 DOPEY1Q5JWR5 2465 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 SPTBN1Q01082 2364 aaKnown RBP17.5■□□□□ 0.39
SYNE4-202ENST00000340477 WIPF3A6NGB9 483 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 AGR2O95994 175 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 MATN1P21941 496 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 IRX1P78414 480 aaPredicted RBP17.5■□□□□ 0.39
SYNE4-202ENST00000340477 GRAMD1BQ3KR37 738 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 ATAD3BQ5T9A4 648 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 ZNF585AQ6P3V2 769 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 ZNF527Q8NB42 609 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 OR5M9Q8NGP3 310 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 PHF10Q8WUB8 498 aaKnown RBP17.5■□□□□ 0.39
SYNE4-202ENST00000340477 RNF138Q8WVD3 245 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 CCDC115Q96NT0 180 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 SIKE1Q9BRV8 207 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 PTGES2Q9H7Z7 377 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 SDR39U1Q9NRG7 319 aaPredicted RBP17.5■□□□□ 0.39
SYNE4-202ENST00000340477 EXD2Q9NVH0 621 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 SPTAN1Q13813 2472 aaKnown RBP17.5■□□□□ 0.39
SYNE4-202ENST00000340477 FREM3P0C091 2139 aa17.5■□□□□ 0.39
SYNE4-202ENST00000340477 C9JVG2 144 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 SCDO00767 359 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 FADS1O60427 444 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 WDR1O75083 606 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 AK1P00568 194 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 SRD5A2P31213 254 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 KHKP50053 298 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 IDH3AP50213 366 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 ANXA11P50995 505 aaKnown RBP17.49■□□□□ 0.39
SYNE4-202ENST00000340477 DGKQP52824 942 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 SF3B4Q15427 424 aaKnown RBP eCLIP17.49■□□□□ 0.39
SYNE4-202ENST00000340477 GXYLT1Q4G148 440 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 EXOSC6Q5RKV6 272 aaKnown RBP17.49■□□□□ 0.39
SYNE4-202ENST00000340477 DCST2Q5T1A1 773 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 C3P1Q6ZMU1 363 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 GALNT10Q86SR1 603 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 IFNEQ86WN2 208 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 WDSUB1Q8N9V3 476 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 FAM83FQ8NEG4 500 aaPredicted RBP17.49■□□□□ 0.39
SYNE4-202ENST00000340477 NTNG2Q96CW9 530 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 TEX37Q96LM6 180 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 PHF12Q96QT6 1004 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 OR7D2Q96RA2 312 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 SLC35A5Q9BS91 424 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 HOXD1Q9GZZ0 328 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 UBQLN4Q9NRR5 601 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 PNPLA3Q9NST1 481 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 SPRR3Q9UBC9 169 aa17.49■□□□□ 0.39
SYNE4-202ENST00000340477 ATP8B1O43520 1251 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 SCN2BO60939 215 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 IGKV1D-16P01601 117 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 NGFRP08138 427 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 HOXD4P09016 255 aaPredicted RBP17.48■□□□□ 0.39
SYNE4-202ENST00000340477 GABRA1P14867 456 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 TBXA2RP21731 343 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 ACVR2AP27037 513 aa17.48■□□□□ 0.39
SYNE4-202ENST00000340477 POLR2JP52435 117 aaKnown RBP17.48■□□□□ 0.39
SYNE4-202ENST00000340477 RPS26P62854 115 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms