RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OR5K2Q8NHB8 316 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 ARHGAP9Q9BRR9 750 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 ABCG5Q9H222 651 aa13.49□□□□□ -0.25
CPSF7-201ENST00000340437 RBFOX1Q9NWB1 397 aaKnown RBP13.49□□□□□ -0.25
CPSF7-201ENST00000340437 EXOSC1Q9Y3B2 195 aaKnown RBP13.49□□□□□ -0.25
CPSF7-201ENST00000340437 LOC105369274A0A096LPK9 316 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 AKAP8O43823 692 aaKnown RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 AIFM1O95831 613 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ENDOUP21128 410 aaKnown RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 GSTM3P21266 225 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 UQCRC1P31930 480 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 PDX1P52945 283 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ST3GAL3Q11203 375 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ZNF234Q14588 700 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ZNF628Q5EBL2 1059 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 OR4N4Q8N0Y3 316 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 SLC16A11Q8NCK7 471 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 OR7G1Q8NGA0 311 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 OR5H6Q8NGV6 325 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 SUN3Q8TAQ9 357 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 PIGKQ92643 395 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ADAP2Q9NPF8 381 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ENAMQ9NRM1 1142 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 GTPBP1O00178 669 aaKnown RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 TPD52L2O43399 206 aaKnown RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ORC5O43913 435 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 CSNK2A2P19784 350 aaPredicted RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 SEC13P55735 322 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ZNF77Q15935 545 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 MTSS1LQ765P7 747 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ERN2Q76MJ5 926 aaKnown RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 KCT2Q8NC54 265 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 CDCP1Q9H5V8 836 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ATP13A2Q9NQ11 1180 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 HINT3Q9NQE9 182 aaKnown RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 DKK3Q9UBP4 350 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 SF3B6Q9Y3B4 125 aaKnown RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 TCF20Q9UGU0 1960 aaKnown RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 DAPL1A0PJW8 107 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 LRIT2A6NDA9 550 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 SCO2O43819 266 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 LILRB3O75022 631 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ALX3O95076 343 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ARSBP15848 533 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 TPBGQ13641 420 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 AGERQ15109 404 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 NDUFA9Q16795 377 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 MINDY4Q4G0A6 757 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 SDE2Q6IQ49 451 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 ESPNLQ6ZVH7 1005 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 GET4Q7L5D6 327 aaPredicted RBP13.48□□□□□ -0.25
CPSF7-201ENST00000340437 IZUMO1Q8IYV9 350 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 TRIM63Q969Q1 353 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 MAT2BQ9NZL9 334 aa13.48□□□□□ -0.25
CPSF7-201ENST00000340437 VCANP13611 3396 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 TOXO94900 526 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 SAGP10523 405 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-201ENST00000340437 EVX1P49640 407 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 HCCSP53701 268 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 EPHA5P54756 1037 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 SIM1P81133 766 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-201ENST00000340437 DSG2Q14126 1118 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 E2F2Q14209 437 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 CEP78Q5JTW2 689 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 CXXC5Q7LFL8 322 aaKnown RBP13.47□□□□□ -0.25
CPSF7-201ENST00000340437 TMEM99Q8N816 258 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 FBXO15Q8NCQ5 510 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-201ENST00000340437 OR4E2Q8NGC2 313 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 OR13C5Q8NGS8 318 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 GRPEL2Q8TAA5 225 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 CDS1Q92903 461 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 RNF170Q96K19 258 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 TAS2R7Q9NYW3 318 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 ZNF780BQ9Y6R6 833 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 H3BSH0 61 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 CDC42EP2O14613 210 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 RPN2P04844 631 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 CD3GP09693 182 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 NOS3P29474 1203 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 P2RY2P41231 377 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 CDK3Q00526 305 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 BNC1Q01954 994 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 YIF1BQ5BJH7 314 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 ZC3H14Q6PJT7 736 aaKnown RBP13.47□□□□□ -0.25
CPSF7-201ENST00000340437 RAB42Q8N4Z0 105 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 GRHL3Q8TE85 626 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 RFKQ969G6 155 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 SLA2Q9H6Q3 261 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 RASD1Q9Y272 281 aa13.47□□□□□ -0.25
CPSF7-201ENST00000340437 SIRT4Q9Y6E7 314 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-201ENST00000340437 A0A1W2PRG6 482 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 CLUP10909 449 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 PEPDP12955 493 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 PRR5P85299 388 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 PEX5LQ8IYB4 626 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 ELMOD2Q8IZ81 293 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 SHISA5Q8N114 240 aa13.46□□□□□ -0.25
CPSF7-201ENST00000340437 POF1BQ8WVV4 589 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms