RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 KCNS3Q9BQ31 491 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 ZNF443Q9Y2A4 671 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 DTX4Q9Y2E6 619 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 PCDH15Q96QU1 1955 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 PTPRZ1P23471 2315 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 A0A0G2JPF8 293 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 SH3PXD2BA1X283 911 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 OR5K4A6NMS3 321 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 CLCA1A8K7I4 914 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 HNRNPCL2B2RXH8 293 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 HNRNPCL3B7ZW38 293 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 LRRN3E7EW58 273 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 HNRNPCL4P0DMR1 293 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 CD27P26842 260 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 UBE2IP63279 158 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 GTF2IRD2BQ6EKJ0 949 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 RNF44Q7L0R7 432 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 GTF2IRD2Q86UP8 949 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 FLVCR1-AS1Q8TAF5 88 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 SLC41A3Q96GZ6 507 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 LRRN3Q9H3W5 708 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 PDE7BQ9NP56 450 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 POLE4Q9NR33 117 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 CHCHD3Q9NX63 227 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 WBP11Q9Y2W2 641 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 CACNA1HO95180 2353 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 TRAV27A0A087WT01 109 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 HYKKA2RU49 373 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 DUXAA6NLW8 204 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 EPPINO95925 133 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 DCKP27707 260 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 SMIM11AP58511 58 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 POU6F2P78424 691 aaPredicted RBP9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 INAVAQ3KP66 663 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 ZC3H12BQ5HYM0 836 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 DESI1Q6ICB0 168 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 FRRS1Q6ZNA5 592 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 GPR135Q8IZ08 494 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 SDR16C5Q8N3Y7 309 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 TSLPQ969D9 159 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 SEMA6CQ9H3T2 930 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 ZSCAN32Q9NX65 697 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 MUTYHQ9UIF7 546 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 MRPS33Q9Y291 106 aaKnown RBP9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 BDP1A6H8Y1 2624 aa9.48□□□□□ -0.89
RBFOX1-202ENST00000340209 IGHV3-20A0A0C4DH32 117 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 SEC14L2O76054 403 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 GYPBP06028 91 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 RNH1P13489 461 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 HNRNPKP61978 463 aaKnown RBP eCLIP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 LIPKQ5VXJ0 399 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 CCDC80Q76M96 950 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 BTLAQ7Z6A9 289 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 SLC15A4Q8N697 577 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 C7orf57Q8NEG2 295 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 RHOXF1Q8NHV9 184 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 ATOH1Q92858 354 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 SAMD8Q96LT4 415 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 C10orf90Q96M02 699 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 CCNB1IP1Q9NPC3 277 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 SLC2A4RGQ9NR83 387 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 H2AFY2Q9P0M6 372 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 RPS6KB2Q9UBS0 482 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 POMT2Q9UKY4 750 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 MGAT4BQ9UQ53 548 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 ERGIC3Q9Y282 383 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 TSC22D4Q9Y3Q8 395 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 ENTPD2Q9Y5L3 495 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 CHURC1-FNTBB4DL54 471 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 H3BSH0 61 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 CLDN4O14493 209 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 LGI1O95970 557 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 ADAP00813 363 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 OPRL1P41146 370 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 CXCL12P48061 93 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 FNTBP49356 437 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 SH3BGRP55822 239 aaPredicted RBP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 CSTF1Q05048 431 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 ST3GAL3Q11203 375 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 CARTPTQ16568 116 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 VWA2Q5GFL6 755 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 OR2G6Q5TZ20 316 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 PSMA8Q8TAA3 256 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 GAB3Q8WWW8 586 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 CNOT9Q92600 299 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 POP5Q969H6 163 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 PRRC1Q96M27 445 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 SDF2Q99470 211 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 ITPAQ9BY32 194 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 DCSTAMPQ9H295 470 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 TAS2R7Q9NYW3 318 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 RIF1Q5UIP0 2472 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 METTL12A8MUP2 240 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 STX11O75558 287 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 CPNE6O95741 557 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 HOXB6P17509 224 aaKnown RBP9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 GABARAPL2P60520 117 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 DAB2P98082 770 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 TRAM2Q15035 370 aa9.47□□□□□ -0.89
RBFOX1-202ENST00000340209 BORAQ6PGQ7 559 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms