RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 VHLLQ6RSH7 139 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 NAA40Q86UY6 237 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 GPR137CQ8N3F9 429 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 DENND1AQ8TEH3 1009 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 SMPDL3AQ92484 453 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 SPTSSAQ969W0 71 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 NAA11Q9BSU3 229 aaPredicted RBP12.21□□□□□ -0.46
USP47-202ENST00000339865 FETUBQ9UGM5 382 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 PCDHGA1Q9Y5H4 931 aa12.21□□□□□ -0.46
USP47-202ENST00000339865 FAAHO00519 579 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 ETV4P43268 484 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 C9orf152Q5JTZ5 239 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 C11orf42Q8N5U0 333 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 GIMAP1Q8WWP7 306 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 ST8SIA2Q92186 375 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 KCNH6Q9H252 994 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 ACTL8Q9H568 366 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 BABAM2Q9NXR7 383 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 EXO1Q9UQ84 846 aaKnown RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 ZNF608Q9ULD9 1512 aaPredicted RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 MAFO75444 373 aaPredicted RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 SULT1C4O75897 302 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 NSA2O95478 260 aaKnown RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 GKP32189 559 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 SHEQ5VZ18 495 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 TMEM71Q6P5X7 295 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 CDKN2AIPNLQ96HQ2 116 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 GNB4Q9HAV0 340 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 RAB9BQ9NP90 201 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 DTLQ9NZJ0 730 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 CHD3Q12873 2000 aaKnown RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 PMM2O15305 246 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 HNRNPDQ14103 355 aaKnown RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 KCNJ8Q15842 424 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 TIPARPQ7Z3E1 657 aaKnown RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 OR6F1Q8NGZ6 308 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 INTS12Q96CB8 462 aaKnown RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 CCM2Q9BSQ5 444 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 HES7Q9BYE0 225 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 MKS1Q9NXB0 559 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 F5H5K5 113 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 CRHBPP24387 322 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 SLC14A2Q15849 920 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 Q1RN00 199 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 BBS10Q8TAM1 723 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 ZBTB8AQ96BR9 441 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 ARSGQ96EG1 525 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 RDH14Q9HBH5 336 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 GSRP00390 522 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 THBS1P07996 1170 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 FBXO45P0C2W1 286 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 OR10J4P0C629 311 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 ARSBP15848 533 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 NUDT1P36639 197 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 GSCP56915 257 aaPredicted RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 SCAPQ12770 1279 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 KIAA0930Q6ICG6 404 aaPredicted RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 KRTCAP2Q8N6L1 136 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 HAS1Q92839 578 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 SLC39A9Q9NUM3 307 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 TCRBV7S3A2A0A539 114 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 ZNF860A6NHJ4 632 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 ACOT7O00154 380 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 CBSLP0DN79 551 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 CBSP35520 551 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 PTGIRP43119 386 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 SLC35A2P78381 396 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 TLE4Q04727 773 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 PLA2G7Q13093 441 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 TATDN3Q17R31 274 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 SPATS1Q496A3 300 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 C10orf62Q5T681 223 aaPredicted RBP12.2□□□□□ -0.46
USP47-202ENST00000339865 FCRLBQ6BAA4 426 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 OR5D16Q8NGK9 328 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 KLHL21Q9UJP4 597 aa12.2□□□□□ -0.46
USP47-202ENST00000339865 VSTM2BA6NLU5 285 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 KDELR3O43731 214 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 HLA-HP01893 362 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 NDUFS1P28331 727 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 EIF2DP41214 584 aaKnown RBP12.19□□□□□ -0.46
USP47-202ENST00000339865 CSKP41240 450 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 EMP3P54852 163 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 SOHLH1Q5JUK2 328 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 CHADLQ6NUI6 762 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 ADGRF3Q8IZF5 1079 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 RBMXL3Q8N7X1 1067 aaKnown RBP12.19□□□□□ -0.46
USP47-202ENST00000339865 DPH3Q96FX2 82 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 LRIG1Q96JA1 1093 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 SRRQ9GZT4 340 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 KCNK12Q9HB15 430 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 AHCTF1Q8WYP5 2266 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 HLA-DQB2P05538 268 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 CPN1P15169 458 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 HLA-DMAP28067 261 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 KDELR2P33947 212 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 TNK1Q13470 666 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 TMEM107Q6UX40 140 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 OR51L1Q8NGJ5 315 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 C2CD4CQ8TF44 421 aa12.19□□□□□ -0.46
USP47-202ENST00000339865 PCNPQ8WW12 178 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms