RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 H1F0P07305 194 aaKnown RBP14.33□□□□□ -0.11
LIMS1-202ENST00000338045 NID1P14543 1247 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 IL7RP16871 459 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 CCKBRP32239 447 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 POLR2IP36954 125 aaKnown RBP14.33□□□□□ -0.11
LIMS1-202ENST00000338045 MC2RQ01718 297 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 TMED1Q13445 227 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 PIN1Q13526 163 aaPredicted RBP14.33□□□□□ -0.11
LIMS1-202ENST00000338045 DGCR6Q14129 220 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 LIN52Q52LA3 116 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 EIPR1Q53HC9 387 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 RNF220Q5VTB9 566 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 ZNF770Q6IQ21 691 aaPredicted RBP14.33□□□□□ -0.11
LIMS1-202ENST00000338045 ZNF836Q6ZNA1 936 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 OVCH1Q7RTY7 1134 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 OFCC1Q8IZS5 231 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 SLC5A8Q8N695 610 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 OR4N2Q8NGD1 307 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 SLC2A12Q8TD20 617 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 ZNF721Q8TF20 911 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 NR4A3Q92570 626 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 SLC46A1Q96NT5 459 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 MUS81Q96NY9 551 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 ITPAQ9BY32 194 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 GRIP2Q9C0E4 1043 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 Q9N2J8 555 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 FBXO8Q9NRD0 319 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 KRT84Q9NSB2 600 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 RXFP3Q9NSD7 469 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 RLIMQ9NVW2 624 aa14.33□□□□□ -0.11
LIMS1-202ENST00000338045 TRBV4-1A0A0J9YWV2 114 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 LOC100130705A0A1B0GUX0 176 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 VSTM2BA6NLU5 285 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 POLR1CO15160 346 aaPredicted RBP14.33□□□□□ -0.12
LIMS1-202ENST00000338045 TPST2O60704 377 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 CBFA2T3O75081 653 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 UGT2B17O75795 530 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 CCNB2O95067 398 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 IGKV1D-16P01601 117 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 CDH2P19022 906 aaPredicted RBP14.33□□□□□ -0.12
LIMS1-202ENST00000338045 CBLP22681 906 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 ELAVL4P26378 380 aaKnown RBP14.33□□□□□ -0.12
LIMS1-202ENST00000338045 OCA2Q04671 838 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 GALNT5Q7Z7M9 940 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 PRSS58Q8IYP2 241 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 ZNF321PQ8N8H1 164 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 ZNF555Q8NEP9 628 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 OR14A16Q8NHC5 309 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 DAZLQ92904 295 aaKnown RBP14.33□□□□□ -0.12
LIMS1-202ENST00000338045 CFL2Q9Y281 166 aa14.33□□□□□ -0.12
LIMS1-202ENST00000338045 RALGAPA1Q6GYQ0 2036 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 CACNA1HO95180 2353 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 CLDN24A6NM45 220 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 A8MUA0 341 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 NPIPB9F8W1W9 429 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 PEX12O00623 359 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 CPNE3O75131 537 aaKnown RBP14.32□□□□□ -0.12
LIMS1-202ENST00000338045 OXSR1O95747 527 aaPredicted RBP14.32□□□□□ -0.12
LIMS1-202ENST00000338045 NAXDQ8IW45 347 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 TAGAPQ8N103 731 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 OR9Q2Q8NGE9 314 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 RNF31Q96EP0 1072 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 ART5Q96L15 291 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 CTRCQ99895 268 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 GABARAPL3Q9BY60 117 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 SLC26A1Q9H2B4 701 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 MAN2C1Q9NTJ4 1040 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 PCDHGA10Q9Y5H3 936 aa14.32□□□□□ -0.12
LIMS1-202ENST00000338045 NPIPA5A0A0B4J1W7 369 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 CDHR4A6H8M9 788 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 NPIPA7E9PJI5 369 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 MEN1O00255 615 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 FAAHO00519 579 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 GDF9O60383 454 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 UGT2B11O75310 529 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 NPIPA8P0DM63 369 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 CCL4P13236 92 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 PPICP45877 212 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 IL18R1Q13478 541 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.31□□□□□ -0.12
LIMS1-202ENST00000338045 FLYWCH1Q4VC44 716 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 DCST1Q5T197 706 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 RBM44Q6ZP01 1051 aaKnown RBP14.31□□□□□ -0.12
LIMS1-202ENST00000338045 SLC7A13Q8TCU3 470 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 DIO2Q92813 273 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 LRFN5Q96NI6 719 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 G6PC3Q9BUM1 346 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 FNDC11Q9BVV2 318 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 OR8D2Q9GZM6 311 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 TMCC3Q9ULS5 477 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 CBLCQ9ULV8 474 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 POFUT2Q9Y2G5 429 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 B4E171 279 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 H3BNH8 94 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 FRS3O43559 492 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 SMIM18P0DKX4 95 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 TSPAN7P41732 249 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 ZNF136P52737 540 aa14.31□□□□□ -0.12
LIMS1-202ENST00000338045 RGS8P57771 180 aaPredicted RBP14.31□□□□□ -0.12
LIMS1-202ENST00000338045 KEAP1Q14145 624 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms