RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 HIPK4Q8NE63 616 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 OR10G3Q8NGC4 313 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 OR5M3Q8NGP4 307 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 COL21A1Q96P44 957 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 SMAD5Q99717 465 aaKnown RBP13.91□□□□□ -0.18
CMC1-201ENST00000334841 SAP130Q9H0E3 1048 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 QRSL1Q9H0R6 528 aaKnown RBP13.91□□□□□ -0.18
CMC1-201ENST00000334841 POLE3Q9NRF9 147 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 PLA2G3Q9NZ20 509 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 ABI3Q9P2A4 366 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 MRTO4Q9UKD2 239 aaKnown RBP13.91□□□□□ -0.18
CMC1-201ENST00000334841 MKLN1Q9UL63 735 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 ANGPT4Q9Y264 503 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 WDR45Q9Y484 360 aa13.91□□□□□ -0.18
CMC1-201ENST00000334841 PCDHGA9Q9Y5G4 932 aaKnown RBP13.91□□□□□ -0.18
CMC1-201ENST00000334841 URB1O60287 2271 aaKnown RBP13.9□□□□□ -0.18
CMC1-201ENST00000334841 NPIPB9F8W1W9 429 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 ABCB7O75027 752 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 PGM3O95394 542 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 UTS2O95399 124 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 ATP6V1C1P21283 382 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 HTR1EP28566 365 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 PGM1P36871 562 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 DCTP40126 519 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 PSMD4P55036 377 aaKnown RBP13.9□□□□□ -0.18
CMC1-201ENST00000334841 VEZF1Q14119 521 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 GNA13Q14344 377 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 GPR68Q15743 365 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 GRAMD1BQ3KR37 738 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 PRAMEF8Q5VWM4 474 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 PRAMEF7Q5VXH5 474 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 REEP3Q6NUK4 255 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 PGM2L1Q6PCE3 622 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 IGFL2Q6UWQ7 119 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 HMGN2P46Q86SG4 172 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 SLC30A8Q8IWU4 369 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 GPALPP1Q8IXQ4 340 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 ULK2Q8IYT8 1036 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 DND1Q8IYX4 353 aaKnown RBP13.9□□□□□ -0.18
CMC1-201ENST00000334841 CYP4Z2PQ8N1L4 340 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 ZNF619Q8N2I2 560 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 FAM13CQ8NE31 585 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 BBS10Q8TAM1 723 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 MCUR1Q96AQ8 359 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 CCDC124Q96CT7 223 aaKnown RBP13.9□□□□□ -0.18
CMC1-201ENST00000334841 NODALQ96S42 347 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 RNF32Q9H0A6 362 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 TRIM45Q9H8W5 580 aaPredicted RBP13.9□□□□□ -0.18
CMC1-201ENST00000334841 BCL2L10Q9HD36 194 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 SH2D2AQ9NP31 389 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 RYDENQ9NUL5 291 aaKnown RBP13.9□□□□□ -0.18
CMC1-201ENST00000334841 HPF1Q9NWY4 346 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 CALML5Q9NZT1 146 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 EGFL7Q9UHF1 273 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 KCNE5Q9UJ90 142 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 ZNF451Q9Y4E5 1061 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 PCDHGA10Q9Y5H3 936 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 CHCHD2Q9Y6H1 151 aaPredicted RBP13.9□□□□□ -0.18
CMC1-201ENST00000334841 LAMA5O15230 3695 aa13.9□□□□□ -0.18
CMC1-201ENST00000334841 DOCK10Q96BY6 2186 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 MED13Q9UHV7 2174 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 A0A0G2JPF8 293 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 OR5H15A6NDH6 313 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 HNRNPCL2B2RXH8 293 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 HNRNPCL3B7ZW38 293 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 ADAM10O14672 748 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 RRP9O43818 475 aaKnown RBP13.89□□□□□ -0.19
CMC1-201ENST00000334841 UGT2B17O75795 530 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 NEURL1O76050 574 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 PDGFAP04085 211 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 HNRNPCL4P0DMR1 293 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 NCK1P16333 377 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 GGT1P19440 569 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 RPS4Y1P22090 263 aaKnown RBP13.89□□□□□ -0.19
CMC1-201ENST00000334841 CD96P40200 585 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 CASRP41180 1078 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 CYB561P49447 251 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 CRYBA2P53672 197 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 OC90Q02509 493 aaPredicted RBP13.89□□□□□ -0.19
CMC1-201ENST00000334841 EFR3AQ14156 821 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 MAPK14Q16539 360 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 AP1ARQ63HQ0 302 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 NUP54Q7Z3B4 507 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 PTRH1Q86Y79 214 aaKnown RBP13.89□□□□□ -0.19
CMC1-201ENST00000334841 FBXW8Q8N3Y1 598 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 OR4C3Q8NH37 302 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 RNF138Q8WVD3 245 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 UTP4Q969X6 686 aaKnown RBP13.89□□□□□ -0.19
CMC1-201ENST00000334841 ZG16BQ96DA0 208 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 SIGLEC12Q96PQ1 595 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 UTP23Q9BRU9 249 aaKnown RBP13.89□□□□□ -0.19
CMC1-201ENST00000334841 PCDHAC1Q9H158 963 aa13.89□□□□□ -0.19
CMC1-201ENST00000334841 SUCOQ9UBS9 1254 aaKnown RBP13.89□□□□□ -0.19
CMC1-201ENST00000334841 ANKRD11Q6UB99 2663 aaPredicted RBP13.88□□□□□ -0.19
CMC1-201ENST00000334841 MKRN2OSH3BPM6 223 aa13.88□□□□□ -0.19
CMC1-201ENST00000334841 K7EM74 188 aa13.88□□□□□ -0.19
CMC1-201ENST00000334841 CXCR6O00574 342 aa13.88□□□□□ -0.19
CMC1-201ENST00000334841 ARPC2O15144 300 aa13.88□□□□□ -0.19
CMC1-201ENST00000334841 HS6ST1O60243 411 aa13.88□□□□□ -0.19
CMC1-201ENST00000334841 OXSR1O95747 527 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms