RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CYSLTR2Q9NS75 346 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 P2RX2Q9UBL9 471 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 TNFRSF10DQ9UBN6 386 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 NUPL2O15504 423 aaKnown RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 FRS3O43559 492 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 UBXN7O94888 489 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 MPC2O95563 127 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 TFPIP10646 304 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 RIN1Q13671 783 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 SLC25A30Q5SVS4 291 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CD276Q5ZPR3 534 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 ARL9Q6T311 187 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 Q6ZVU0 165 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 TRMT11Q7Z4G4 463 aaKnown RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 HDDC2Q7Z4H3 204 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 TBC1D19Q8N5T2 526 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 RASGEF1AQ8N9B8 481 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 SLC5A11Q8WWX8 675 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 RBPMSQ93062 196 aaKnown RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 NXPE3Q969Y0 559 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 OR2M2Q96R28 347 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 DDX31Q9H8H2 851 aaKnown RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 AHSPQ9NZD4 102 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
SYNE3-201ENST00000334258 CSNK1G3Q9Y6M4 447 aa12.89□□□□□ -0.35
SYNE3-201ENST00000334258 A0A1W2PPL8 197 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 FAM183AA6NL82 134 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 PI15O43692 258 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 NTN1O95631 604 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 MYOGP15173 224 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 RECQLP46063 649 aaPredicted RBP12.88□□□□□ -0.35
SYNE3-201ENST00000334258 SLC16A1P53985 500 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 FAM209BQ5JX69 171 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 C1orf94Q6P1W5 598 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 C22orf39Q6P5X5 142 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 KANSL1Q7Z3B3 1105 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 PRSS42Q7Z5A4 293 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 DNAJB7Q7Z6W7 309 aaPredicted RBP12.88□□□□□ -0.35
SYNE3-201ENST00000334258 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 OR8D4Q8NGM9 314 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 ZSWIM3Q96MP5 696 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 SEC22CQ9BRL7 303 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 GSX2Q9BZM3 304 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 PPA2Q9H2U2 334 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 OR51I1Q9H343 314 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 LIN7BQ9HAP6 207 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 HCFC1R1Q9NWW0 138 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 SLCO1C1Q9NYB5 712 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 HCN3Q9P1Z3 774 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 SCML1Q9UN30 329 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 TMEM5Q9Y2B1 443 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 GON4LQ3T8J9 2241 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 A0A0G2JN53 185 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 TOR1AO14656 332 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 RB1P06400 928 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 GNSP15586 552 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 PAICSP22234 425 aaKnown RBP12.88□□□□□ -0.35
SYNE3-201ENST00000334258 IFNGR2P38484 337 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 OR10A3P58181 314 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 POLR2LP62875 67 aaKnown RBP12.88□□□□□ -0.35
SYNE3-201ENST00000334258 CDC73Q6P1J9 531 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 CMTM8Q8IZV2 173 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 BBS1Q8NFJ9 593 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 ERMAPQ96PL5 475 aaPredicted RBP12.88□□□□□ -0.35
SYNE3-201ENST00000334258 F2RL3Q96RI0 385 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 QRSL1Q9H0R6 528 aaKnown RBP12.88□□□□□ -0.35
SYNE3-201ENST00000334258 DPP7Q9UHL4 492 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 NUBP2Q9Y5Y2 271 aa12.88□□□□□ -0.35
SYNE3-201ENST00000334258 A0A087WUU8 490 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 C7orf66A4D0T2 115 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 GPR171O14626 319 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 RGS9O75916 674 aaPredicted RBP12.87□□□□□ -0.35
SYNE3-201ENST00000334258 KLHL18O94889 574 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 POP4O95707 220 aaKnown RBP12.87□□□□□ -0.35
SYNE3-201ENST00000334258 SERPIND1P05546 499 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 H2AFB2P0C5Z0 115 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 ACP5P13686 325 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 HBMQ6B0K9 141 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 NXPE4Q6UWF7 544 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 IKBIPQ70UQ0 350 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 NR2C2APQ86WQ0 139 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 SIAH3Q8IW03 269 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 GPALPP1Q8IXQ4 340 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 ZNF461Q8TAF7 563 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 IL17FQ96PD4 163 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 RBP7Q96R05 134 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 CFHR5Q9BXR6 569 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 ISG20L2Q9H9L3 353 aaKnown RBP12.87□□□□□ -0.35
SYNE3-201ENST00000334258 ZNF334Q9HCZ1 680 aaPredicted RBP12.87□□□□□ -0.35
SYNE3-201ENST00000334258 NEUROD4Q9HD90 331 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 ZCCHC3Q9NUD5 404 aaKnown RBP12.87□□□□□ -0.35
SYNE3-201ENST00000334258 YIPF1Q9Y548 306 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 RPS10-NUDT3A0A1W2PQS6 291 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 CPSF4LA6NMK7 179 aaKnown RBP12.87□□□□□ -0.35
SYNE3-201ENST00000334258 RNGTTO60942 597 aaKnown RBP12.87□□□□□ -0.35
SYNE3-201ENST00000334258 OR5F1O95221 314 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 RRASP10301 218 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 LCN1P31025 176 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 CLCNKAP51800 687 aa12.87□□□□□ -0.35
SYNE3-201ENST00000334258 MAP2K6P52564 334 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms