RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TMEM44Q2T9K0 475 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 SMARCD3Q6STE5 483 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 MRGPREQ86SM8 312 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 FAM71CQ8NEG0 241 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 LRRC46Q96FV0 321 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 ZFP3Q96NJ6 502 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 YIPF4Q9BSR8 244 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 FNDC11Q9BVV2 318 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 EVA1AQ9H8M9 152 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 ZDHHC3Q9NYG2 299 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 MLXQ9UH92 298 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 A4GNTQ9UNA3 340 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 CA5BQ9Y2D0 317 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 CHST2Q9Y4C5 530 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 GSAPA4D1B5 854 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 FAM25EA8MYX2 175 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 KDM4BO94953 1096 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 ELNP15502 786 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 SLC11A2P49281 568 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 TAF12Q16514 161 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 Q6ZTK2 550 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 TPRA1Q86W33 373 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 HORMAD2Q8N7B1 307 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 TMEM19Q96HH6 336 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 IFT27Q9BW83 186 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 PLA2G12AQ9BZM1 189 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 A4GALTQ9NPC4 353 aa22.83■■□□□ 1.25
SOX1-201ENST00000330949 HELZP42694 1942 aaKnown RBP22.83■■□□□ 1.25
SOX1-201ENST00000330949 A0A1B0GUH1 482 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 FAM74A7A6NL05 159 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 LINC01387J3KSC0 135 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 CD160O95971 181 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 ANKRD34CP0C6C1 535 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 UQCRC2P22695 453 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 KCNJ5P48544 419 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 MC1RQ01726 317 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 FAM74A3Q4VXF1 159 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 ZNF322Q6U7Q0 402 aaPredicted RBP22.83■■□□□ 1.24
SOX1-201ENST00000330949 OR4D11Q8NGI4 311 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 UROC1Q96N76 676 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 MTG2Q9H4K7 406 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 COA4Q9NYJ1 87 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 PIPOXQ9P0Z9 390 aa22.83■■□□□ 1.24
SOX1-201ENST00000330949 A0A1B0GW55 424 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 ZNF254O75437 659 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 OAZ2O95190 189 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 IGHA1P01876 353 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 WNT1P04628 370 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 DUX4L2P0CJ85 424 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 DUX4L3P0CJ86 424 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 DUX4L4P0CJ87 422 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 DUX4L5P0CJ88 424 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 DUX4L6P0CJ89 424 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 DUX4L7P0CJ90 424 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 MAPK9P45984 424 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 CAP1Q01518 475 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 CRHR2Q13324 411 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 HTR4Q13639 388 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 KLF9Q13886 244 aaPredicted RBP22.82■■□□□ 1.24
SOX1-201ENST00000330949 RNF219Q5W0B1 726 aaPredicted RBP22.82■■□□□ 1.24
SOX1-201ENST00000330949 FBXO22Q8NEZ5 403 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 ZNF649Q9BS31 505 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 DUX4Q9UBX2 424 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 SLC9B1P1A6NJY1 282 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 TEX46H3BTG2 121 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 MID1O15344 667 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 PPP3CBP16298 524 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 SHC1P29353 583 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 FLT3LGP49771 235 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 RPS13P62277 151 aaKnown RBP22.82■■□□□ 1.24
SOX1-201ENST00000330949 GK2Q14410 553 aaPredicted RBP22.82■■□□□ 1.24
SOX1-201ENST00000330949 PRSS55Q6UWB4 352 aaPredicted RBP22.82■■□□□ 1.24
SOX1-201ENST00000330949 VRK3Q8IV63 474 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 SEC22CQ9BRL7 303 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 EGLN3Q9H6Z9 239 aa22.82■■□□□ 1.24
SOX1-201ENST00000330949 H0YC42 278 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 SYN3O14994 580 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 SUSD5O60279 629 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 GALR3O60755 368 aaPredicted RBP22.81■■□□□ 1.24
SOX1-201ENST00000330949 UBXN7O94888 489 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 CPN1P15169 458 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 SDHBP21912 280 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 DEFA5Q01523 94 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 FAM69AQ5T7M9 428 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 PAQR7Q86WK9 346 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 ASB12Q8WXK4 309 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 GPA33Q99795 319 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 SMG9Q9H0W8 520 aaKnown RBP22.81■■□□□ 1.24
SOX1-201ENST00000330949 GABRA1P14867 456 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 ATP6V1E1P36543 226 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 CBARPQ8N350 705 aaPredicted RBP22.81■■□□□ 1.24
SOX1-201ENST00000330949 ZDHHC1Q8WTX9 485 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 BCL7CQ8WUZ0 217 aaPredicted RBP22.81■■□□□ 1.24
SOX1-201ENST00000330949 NKX6-2Q9C056 277 aaPredicted RBP22.81■■□□□ 1.24
SOX1-201ENST00000330949 TEX10Q9NXF1 929 aaPredicted RBP22.81■■□□□ 1.24
SOX1-201ENST00000330949 MED11Q9P086 117 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 SEC14L3Q9UDX4 400 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 EXOGQ9Y2C4 368 aaKnown RBP22.81■■□□□ 1.24
SOX1-201ENST00000330949 SLC6A5Q9Y345 797 aa22.81■■□□□ 1.24
SOX1-201ENST00000330949 H2AFB1P0C5Y9 115 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms