RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 MAP1SQ66K74 1059 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 GDF6Q6KF10 455 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CATSPERGQ6ZRH7 1159 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ENTHD1Q8IYW4 607 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 RAB39BQ96DA2 213 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PSAT1Q9Y617 370 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SLIT1O75093 1534 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 NFATC1O95644 943 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 HTR1EP28566 365 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ETV3P41162 512 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 LILRA4P59901 499 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PRSS55Q6UWB4 352 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TMPPEQ6ZT21 453 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PARP16Q8N5Y8 322 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SLC35F5Q8WV83 523 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ALG8Q9BVK2 526 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 RAB11FIP5Q9BXF6 653 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 KCNIP2Q9NS61 270 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CLTCQ00610 1675 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 GGT3PA6NGU5 568 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 HLA-DMAP28067 261 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 GAB1Q13480 694 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FIGNL1Q6PIW4 674 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 RNF111Q6ZNA4 994 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 OR8J3Q8NGG0 315 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SPRYD4Q8WW59 207 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SLC22A18Q96BI1 424 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 MYO9BQ13459 2157 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 A0A1W2PPV4 95 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PMM2O15305 246 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 EBLN1P0CF75 366 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CBSLP0DN79 551 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PCSK2P16519 638 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 OMGP23515 440 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CBSP35520 551 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PCBP1Q15365 356 aaKnown RBP eCLIP12.12□□□□□ -0.475e-20■■□□□ 14.2
RAB11FIP1-202ENST00000330843 NATD1Q8N6N6 113 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SLC2A12Q8TD20 617 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 POM121Q96HA1 1249 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 RDH14Q9HBH5 336 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 OSGIN2Q9Y236 505 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 DVL2O14641 736 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ADAMTS19Q8TE59 1207 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TXNDC15Q96J42 360 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FAM96BQ9Y3D0 163 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CHD2O14647 1828 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ANKRD34BA5PLL1 514 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 VSTM5A8MXK1 200 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TERTO14746 1132 aaKnown RBP12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PFKLP17858 780 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 THBS2P35442 1172 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 MLF1P58340 268 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 C17orf107Q6ZR85 190 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ACTRT3Q9BYD9 372 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 METTL17Q9H7H0 456 aaPredicted RBP12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ARNT2Q9HBZ2 717 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 LUZP4Q9P127 313 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TMPRSS11EQ9UL52 423 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 EVPLQ92817 2033 aa12.12□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ITGB2P05107 769 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 BMP4P12644 408 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PDZK1IP1Q13113 114 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CDK5R2Q13319 367 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 EBPQ15125 230 aaKnown RBP12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TP53I3Q53FA7 332 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 VARS2Q5ST30 1063 aaKnown RBP12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 LRRTM4Q86VH4 590 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 NLGN4YQ8NFZ3 816 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ENPP5Q9UJA9 477 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 DISP2A7MBM2 1401 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 RNF212BA8MTL3 300 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 MMP20O60882 483 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SDC3O75056 442 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 KCNK2O95069 426 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 NME2P22392 152 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CRHBPP24387 322 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PKLRP30613 574 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ADGRF1Q5T601 910 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TXNDC8Q6A555 127 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FOXRED1Q96CU9 486 aaPredicted RBP12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 ELP4Q96EB1 424 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SLC6A17Q9H1V8 727 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 NOX3Q9HBY0 568 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 MRM3Q9HC36 420 aaKnown RBP12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 KLHL21Q9UJP4 597 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 H7BY64 318 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CHEK1O14757 476 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FANCGO15287 622 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PNMTP11086 282 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 CPT2P23786 658 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 OR4D2P58180 307 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 TREML2Q5T2D2 321 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 HORMAD2Q8N7B1 307 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 FNDC9Q8TBE3 224 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 PRAP1Q96NZ9 151 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 SRRQ9GZT4 340 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 OR52A5Q9H2C5 316 aa12.11□□□□□ -0.47
RAB11FIP1-202ENST00000330843 DNAJC5Q9H3Z4 198 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms