RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 GXYLT1Q4G148 440 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 RIPPLY2Q5TAB7 128 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 SCIMPQ6UWF3 145 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 C16orf47Q6ZP98 133 aaPredicted RBP5.79□□□□□ -1.48
SMG1-201ENST00000330588 GDF7Q7Z4P5 450 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 SRRM1Q8IYB3 904 aaKnown RBP5.79□□□□□ -1.48
SMG1-201ENST00000330588 NATD1Q8N6N6 113 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 CCNYL1Q8N7R7 359 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 OR10G3Q8NGC4 313 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 HOXB13Q92826 284 aaPredicted RBP5.79□□□□□ -1.48
SMG1-201ENST00000330588 HGDQ93099 445 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 TMCO6Q96DC7 493 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 APIPQ96GX9 242 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 RCC1LQ96I51 464 aaKnown RBP5.79□□□□□ -1.48
SMG1-201ENST00000330588 VSTM2LQ96N03 204 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 NXF5Q9H1B4 397 aaKnown RBP5.79□□□□□ -1.48
SMG1-201ENST00000330588 EML4Q9HC35 981 aaKnown RBP5.79□□□□□ -1.48
SMG1-201ENST00000330588 C1orf109Q9NX04 203 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 TAS2R9Q9NYW1 312 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 NTMQ9P121 344 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 HEY2Q9UBP5 337 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 ABCG2Q9UNQ0 655 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 C19orf53Q9UNZ5 99 aaPredicted RBP5.79□□□□□ -1.48
SMG1-201ENST00000330588 MAPRE3Q9UPY8 281 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 C15orf41Q9Y2V0 281 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 EMC9Q9Y3B6 208 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 CCL27Q9Y4X3 112 aa5.79□□□□□ -1.48
SMG1-201ENST00000330588 PTPN13Q12923 2485 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 DOPEY1Q5JWR5 2465 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 NBASA2RRP1 2371 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 FAM166BA8MTA8 275 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 GOSR1O95249 250 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 SLU7O95391 586 aaKnown RBP5.78□□□□□ -1.48
SMG1-201ENST00000330588 ACTL6AO96019 429 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 CHN1P15882 459 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 TSPAN8P19075 237 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 CAPN3P20807 821 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 SSTR2P30874 369 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 GCKP35557 465 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 TIMP3P35625 211 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 PIGAP37287 484 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 RPL3P39023 403 aaKnown RBP5.78□□□□□ -1.48
SMG1-201ENST00000330588 ASMTP46597 345 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 ALDH9A1P49189 494 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 PCYT1AP49585 367 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 VSNL1P62760 191 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 PPP2R2AP63151 447 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 EEF1A1P68104 462 aaKnown RBP5.78□□□□□ -1.48
SMG1-201ENST00000330588 HSF1Q00613 529 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 DUSP8Q13202 625 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 PDE7AQ13946 482 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 MLC1Q15049 377 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 SLC25A35Q3KQZ1 300 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 TCHHL1Q5QJ38 904 aaPredicted RBP5.78□□□□□ -1.48
SMG1-201ENST00000330588 EEF1A1P5Q5VTE0 462 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 FNDC7Q5VTL7 733 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 KANK2Q63ZY3 851 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 TIGD3Q6B0B8 471 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 LRIG3Q6UXM1 1119 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 B3GNT6Q6ZMB0 384 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 TSPYL5Q86VY4 417 aaPredicted RBP5.78□□□□□ -1.48
SMG1-201ENST00000330588 GSPT2Q8IYD1 628 aaKnown RBP5.78□□□□□ -1.48
SMG1-201ENST00000330588 LRRC34Q8IZ02 419 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 OR2L13Q8N349 312 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 BVESQ8NE79 360 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 OR52R1Q8NGF1 315 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 OR6Y1Q8NGX8 325 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 ZFP28Q8NHY6 868 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 CA5BP1Q8WTZ4 195 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 DIO2Q92813 273 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 UCN3Q969E3 161 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 PPP1R14AQ96A00 147 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 OMA1Q96E52 524 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 MPP4Q96JB8 637 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 RILPQ96NA2 401 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 ZFP3Q96NJ6 502 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 TTYH2Q9BSA4 534 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 SPATA9Q9BWV2 254 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 OSBPL11Q9BXB4 747 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 ITPAQ9BY32 194 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 PFDN4Q9NQP4 134 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 ACSS1Q9NUB1 689 aaPredicted RBP5.78□□□□□ -1.48
SMG1-201ENST00000330588 GIN1Q9NXP7 522 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 MRTO4Q9UKD2 239 aaKnown RBP5.78□□□□□ -1.48
SMG1-201ENST00000330588 RABL2BQ9UNT1 228 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 EXO1Q9UQ84 846 aaKnown RBP5.78□□□□□ -1.48
SMG1-201ENST00000330588 TIMM22Q9Y584 194 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 ICE1Q9Y2F5 2266 aa5.78□□□□□ -1.48
SMG1-201ENST00000330588 A0A1W2PS29 197 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 PRAMEF25A6NGN4 478 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 CD8B2A6NJW9 211 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 HSPB2A8KAH6 182 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 AZIN1O14977 448 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 TSPAN2O60636 221 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 ERN1O75460 977 aaKnown RBP5.77□□□□□ -1.49
SMG1-201ENST00000330588 CRCPO75575 148 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 CBR3O75828 277 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 HSPA4LO95757 839 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 EPPINO95925 133 aa5.77□□□□□ -1.49
SMG1-201ENST00000330588 HNRNPCP07910 306 aaKnown RBP eCLIP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms