RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RHNO1Q9BSD3 238 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 YIPF2Q9BWQ6 316 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 LHPPQ9H008 270 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 NECTIN3Q9NQS3 549 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 FSCN3Q9NQT6 498 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 PLCXD1Q9NUJ7 323 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 NTNG1Q9Y2I2 539 aa13.88□□□□□ -0.19
TPM3-205ENST00000328159 ZNF701M0R085 212 aaPredicted RBP13.87□□□□□ -0.19
TPM3-205ENST00000328159 PEX12O00623 359 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 RGS10O43665 173 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 MRPS14O60783 128 aaKnown RBP13.87□□□□□ -0.19
TPM3-205ENST00000328159 PRAMEF2O60811 474 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 KCNK2O95069 426 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 OR5F1O95221 314 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 SOX14O95416 240 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 IFNA16P05015 189 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 NID1P14543 1247 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 PNLIPP16233 465 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 PCMT1P22061 227 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 MMP11P24347 488 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 GALNSP34059 522 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 CNR2P34972 360 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 OR1D4P47884 311 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 ALDH6A1Q02252 535 aaKnown RBP13.87□□□□□ -0.19
TPM3-205ENST00000328159 COX10Q12887 443 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 BIKQ13323 160 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 SERTAD2Q14140 314 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 HLA-BQ31612 363 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 GPR107Q5VW38 600 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 AP1ARQ63HQ0 302 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 GTF2IRD2BQ6EKJ0 949 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 C1orf94Q6P1W5 598 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 ZER1Q7Z7L7 766 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 GTF2IRD2Q86UP8 949 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 GPR135Q8IZ08 494 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 ALDH16A1Q8IZ83 802 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.87□□□□□ -0.19
TPM3-205ENST00000328159 MUL1Q969V5 352 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 ZNF578Q96N58 590 aaPredicted RBP13.87□□□□□ -0.19
TPM3-205ENST00000328159 NDC1Q9BTX1 674 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 CNPPD1Q9BV87 410 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 GMEB2Q9UKD1 530 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 CDC14AQ9UNH5 594 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 PCDHGB1Q9Y5G3 927 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 PCDHGA10Q9Y5H3 936 aa13.87□□□□□ -0.19
TPM3-205ENST00000328159 A0A087WUU8 490 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 CPED1A4D0V7 1026 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 M0R129 80 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 AHCYL1O43865 530 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 MPZL2O60487 215 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 MT-ND2P03891 347 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 TP53P04637 393 aaPredicted RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 IGFBP1P08833 259 aaPredicted RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 MSL3P1P0C860 447 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 DCKP27707 260 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 ZNF136P52737 540 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 LSM11P83369 360 aaKnown RBP eCLIP13.86□□□□□ -0.19
TPM3-205ENST00000328159 EMX1Q04741 257 aaPredicted RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 FUT7Q11130 342 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 MRPL2Q5T653 305 aaKnown RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 PRAMEF17Q5VTA0 474 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 SLX4IPQ5VYV7 408 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 ZC3H14Q6PJT7 736 aaKnown RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 ZAR1Q86SH2 424 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 ZNF420Q8TAQ5 688 aaPredicted RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 OR1F2PQ96R84 312 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 ZNF768Q9H5H4 540 aaKnown RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 C11orf16Q9NQ32 467 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 DHCR7Q9UBM7 475 aaKnown RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 SERTAD3Q9UJW9 196 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 SLC6A14Q9UN76 642 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 ERVK-19Q9WJR5 959 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 MMACHCQ9Y4U1 282 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 NUP210LQ5VU65 1888 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 ADAMTS9Q9P2N4 1935 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 TECTAO75443 2155 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 LY6G6EA0A0G2JKS1 128 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 H3BN98 237 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 SIGLEC6O43699 453 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 GUSBP08236 651 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 TNNI3P19429 210 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 IFNGR2P38484 337 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 PGDP52209 483 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 DECR1Q16698 335 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 PERM1Q5SV97 790 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 GUSBP11Q6P575 273 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 TMEM71Q6P5X7 295 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 PTCHD4Q6ZW05 846 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 AHSA2Q719I0 299 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 MED25Q71SY5 747 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 PRSS48Q7RTY5 328 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 GDF7Q7Z4P5 450 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 RANBP3LQ86VV4 465 aaPredicted RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 C1orf210Q8IVY1 113 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 SVOPQ8N4V2 548 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 GNPDA2Q8TDQ7 276 aa13.86□□□□□ -0.19
TPM3-205ENST00000328159 C12orf43Q96C57 262 aaKnown RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 ZNF501Q96CX3 271 aaPredicted RBP13.86□□□□□ -0.19
TPM3-205ENST00000328159 SLC41A3Q96GZ6 507 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms