RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 MALLQ13021 153 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 ZNF425Q6IV72 752 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 ERN2Q76MJ5 926 aaKnown RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 C2orf15Q8WU43 125 aaKnown RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 HOXB13Q92826 284 aaPredicted RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 STRADBQ9C0K7 418 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 MINDY3Q9H8M7 445 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 AIG1Q9NVV5 245 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 WRAP73Q9P2S5 460 aaPredicted RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 ACACAQ13085 2346 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 APOA2P02652 100 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 NR2C1P13056 603 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 IRF2P14316 349 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 RRAS2P62070 204 aaPredicted RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 SMAD2Q15796 467 aaKnown RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 FAM189A2Q15884 450 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 TIFABQ6ZNK6 161 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 NRROSQ86YC3 692 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 OR2AP1Q8NGE2 309 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 SCAMP4Q969E2 229 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 TSGA13Q96PP4 275 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 B3GNT2Q9NY97 397 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 OPN1LWP04000 364 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 GCGRP47871 477 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 MS4A13Q5J8X5 152 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 FOXR2Q6PJQ5 311 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 CSNK1A1LQ8N752 337 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 CWH43Q9H720 699 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 HIF1ANQ9NWT6 349 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 YLPM1P49750 1951 aaKnown RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 CD9P21926 228 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 TAS2R43P59537 309 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 EEF1A1P5Q5VTE0 462 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 KIAA1211LQ6NV74 962 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 IL22RA1Q8N6P7 574 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 PQLC3Q8N755 202 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 OR2T33Q8NG76 320 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 OR1S1Q8NH92 325 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 LURAP1Q96LR2 239 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 VPS25Q9BRG1 176 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 FMN2Q9NZ56 1722 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 PIM1P11309 404 aaPredicted RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 OMGP23515 440 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 MS4A2Q01362 244 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 ZNF169Q14929 603 aaPredicted RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 TMEM35AQ53FP2 167 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 ATG9BQ674R7 924 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 IL17RCQ8NAC3 791 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 URM1Q9BTM9 101 aaKnown RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 MROQ9BYG7 248 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 SIAEQ9HAT2 523 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 TMEM100Q9NV29 134 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 RLIMQ9NVW2 624 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 QPCTLQ9NXS2 382 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 C5AR2Q9P296 337 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 CNOT11Q9UKZ1 510 aaKnown RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 MCM3APO60318 1980 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 WASH4PA8MWX3 477 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 PMM2O15305 246 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 GABRR1P24046 479 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 FOXK1P85037 733 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 C6orf136Q5SQH8 315 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 CELF5Q8N6W0 485 aaKnown RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 OR4K14Q8NGD5 310 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 OR51Q1Q8NH59 317 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 OAS1P00973 400 aaKnown RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 NDUFS1P28331 727 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 FAM122CQ6P4D5 195 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 CDHR3Q6ZTQ4 885 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 CMIPQ8IY22 773 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 NUP43Q8NFH3 380 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 DNAJB8Q8NHS0 232 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 NR4A3Q92570 626 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 CNIH4Q9P003 139 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 ZNF230Q9UIE0 474 aaPredicted RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 DCDC2BA2VCK2 349 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 FADS1O60427 444 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 SORDQ00796 357 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 BCL7AQ4VC05 210 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 EOGTQ5NDL2 527 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 SLC22A10Q63ZE4 541 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 BBS10Q8TAM1 723 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 CD244Q9BZW8 370 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 METTL17Q9H7H0 456 aaPredicted RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 A0A096LPI6 279 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 HOXA10P31260 410 aaPredicted RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 MRPL49Q13405 166 aaKnown RBP7.5□□□□□ -1.21
CIITA-201ENST00000324288 DEFB110Q30KQ9 67 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 KLHDC7BQ96G42 594 aa7.5□□□□□ -1.21
CIITA-201ENST00000324288 IGLON5A6NGN9 336 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 STC1P52823 247 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 TLE3Q04726 772 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 MEDAGQ5VYS4 303 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 DRICH1Q6PGQ1 229 aaPredicted RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 OSTM1Q86WC4 334 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 PAPD5Q8NDF8 572 aaKnown RBP7.49□□□□□ -1.21
CIITA-201ENST00000324288 OR8K5Q8NH50 307 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 LIPHQ8WWY8 451 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 POTEKPQ9BYX7 375 aa7.49□□□□□ -1.21
CIITA-201ENST00000324288 FAM86C1Q9NVL1 165 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms