RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 KNDC1Q76NI1 1749 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 NUAK1O60285 661 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 HOXB5P09067 269 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 FUT1P19526 365 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 TACR1P25103 407 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 C21orf33P30042 268 aaPredicted RBP8.34□□□□□ -1.07
SSBP2-201ENST00000320672 CAV2P51636 162 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 RIDAP52758 137 aaKnown RBP8.34□□□□□ -1.07
SSBP2-201ENST00000320672 CXCR4P61073 352 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 PRAMEF8Q5VWM4 474 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 PRAMEF7Q5VXH5 474 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 FBXW12Q6X9E4 464 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 SLC30A8Q8IWU4 369 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 ZDHHC12Q96GR4 267 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 GCM1Q9NP62 436 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 OR6C2Q9NZP2 312 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 CAMK2AQ9UQM7 478 aa8.34□□□□□ -1.07
SSBP2-201ENST00000320672 DUX1O43812 170 aa8.34□□□□□ -1.08
SSBP2-201ENST00000320672 HMGN2P05204 90 aaKnown RBP8.34□□□□□ -1.08
SSBP2-201ENST00000320672 PNMTP11086 282 aa8.34□□□□□ -1.08
SSBP2-201ENST00000320672 NPR2P20594 1047 aa8.34□□□□□ -1.08
SSBP2-201ENST00000320672 PAX3P23760 479 aa8.34□□□□□ -1.08
SSBP2-201ENST00000320672 FGFBP1Q14512 234 aa8.34□□□□□ -1.08
SSBP2-201ENST00000320672 C10orf62Q5T681 223 aaPredicted RBP8.34□□□□□ -1.08
SSBP2-201ENST00000320672 TMEM173Q86WV6 379 aaPredicted RBP8.34□□□□□ -1.08
SSBP2-201ENST00000320672 KIAA1143Q96AT1 154 aaPredicted RBP8.34□□□□□ -1.08
SSBP2-201ENST00000320672 ZNF689Q96CS4 500 aaPredicted RBP8.34□□□□□ -1.08
SSBP2-201ENST00000320672 SEC22AQ96IW7 307 aa8.34□□□□□ -1.08
SSBP2-201ENST00000320672 TSPAN10Q9H1Z9 355 aaPredicted RBP8.34□□□□□ -1.08
SSBP2-201ENST00000320672 GALNT9Q9HCQ5 603 aa8.34□□□□□ -1.08
SSBP2-201ENST00000320672 FKBP14Q9NWM8 211 aa8.34□□□□□ -1.08
SSBP2-201ENST00000320672 LUZP4Q9P127 313 aa8.34□□□□□ -1.08
SSBP2-201ENST00000320672 TRBV11-1A0A0K0K1C0 115 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 A8MVJ9 347 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 P04436 131 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 FRKP42685 505 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 MNX1P50219 401 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 LIPJQ5W064 366 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 ZNF704Q6ZNC4 412 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 TIFABQ6ZNK6 161 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 ARL14Q8N4G2 192 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 BBS1Q8NFJ9 593 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 IL17RDQ8NFM7 739 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 ZFP90Q8TF47 636 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 IL23AQ9NPF7 189 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 NTNG1Q9Y2I2 539 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 SOX15O60248 233 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 DCNP07585 359 aaKnown RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 IRS1P35568 1242 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 ERVFC1P60507 584 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 ZNF45Q02386 682 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 FGL1Q08830 312 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 SLC35F2Q8IXU6 374 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 DNAJC5GQ8N7S2 189 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 STK35Q8TDR2 534 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 MAELQ96JY0 434 aaKnown RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 RARRES3Q9UL19 164 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 EXOSC1Q9Y3B2 195 aaKnown RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 AGAP5A6NIR3 686 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 SYT7O43581 403 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 RFC3P40938 356 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 ZNF84P51523 738 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 NADSYN1Q6IA69 706 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 GLB1L2Q8IW92 636 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 GSTO2Q9H4Y5 243 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 PISDQ9UG56 409 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 CASC3O15234 703 aaKnown RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 PROS1P07225 676 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 CRHBPP24387 322 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 HSD17B2P37059 387 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 RBM34P42696 430 aaKnown RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 TLE3Q04726 772 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 MOB3CQ70IA8 216 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 LINC00346Q8IVM7 164 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 BEST3Q8N1M1 668 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 PATE1Q8WXA2 126 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 CASD1Q96PB1 797 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 ZNF717Q9BY31 904 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 OPA3Q9H6K4 179 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 CCM2LQ9NUG4 571 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 RLIMQ9NVW2 624 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 C10orf71Q711Q0 1435 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 MPPED1O15442 326 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 SLC2A1P11166 492 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 ZNF43P17038 809 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 IVDP26440 423 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 IRF4Q15306 451 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 SLC9A3R2Q15599 337 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 OR7E24Q6IFN5 339 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 FAM83FQ8NEG4 500 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 DVL3Q92997 716 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 TSNAXQ99598 290 aaKnown RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 TXNDC12O95881 172 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 ZNF14P17017 642 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 PVALBP20472 110 aaPredicted RBP8.33□□□□□ -1.08
SSBP2-201ENST00000320672 RAB28P51157 221 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 TMEM179BQ7Z7N9 219 aa8.33□□□□□ -1.08
SSBP2-201ENST00000320672 LIX1LQ8IVB5 337 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms