RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 LRFN5Q96NI6 719 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 UQCC2Q9BRT2 126 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 PDGFDQ9GZP0 370 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SLC25A32Q9H2D1 315 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 C11orf49Q9H6J7 331 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 GKN1Q9NS71 199 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 KLHL9Q9P2J3 617 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 NDRG3Q9UGV2 375 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 C2orf92A0A1B0GVN3 265 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SCO1O75880 301 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ENPP1P22413 925 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 PPM1FP49593 454 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 AGFG1P52594 562 aaKnown RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 DOC2BQ14184 412 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 DECR1Q16698 335 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 KHDRBS2Q5VWX1 349 aaKnown RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SAMD14Q8IZD0 417 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 CPXM2Q8N436 756 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 OR11H7Q8NGC8 314 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SFXN5Q8TD22 340 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF480Q8WV37 535 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 GIMAP1Q8WWP7 306 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 THRSPQ92748 146 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 B3GNT4Q9C0J1 378 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 GAREM1Q9H706 876 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 MAN2C1Q9NTJ4 1040 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 A4GNTQ9UNA3 340 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 KLF2Q9Y5W3 355 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 UPK3BL1B0FP48 263 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 UPK3BL2E5RIL1 263 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 GMDSO60547 372 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR2A4O95047 310 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 EGFP01133 1207 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 KELP23276 732 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 BUD31P41223 144 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 HOXA1P49639 335 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TAS2R41P59536 307 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 LGALS3BPQ08380 585 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TSTA3Q13630 321 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 FUT10Q6P4F1 479 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 LYPD4Q6UWN0 246 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CXCL17Q6UXB2 119 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PGAP1Q75T13 922 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CEACAM19Q7Z692 300 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 LURAP1LQ8IV03 231 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SPAG16Q8N0X2 631 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR6C4Q8NGE1 309 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR8D4Q8NGM9 314 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TRMT10AQ8TBZ6 339 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 NEIL2Q969S2 332 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR2A7Q96R45 310 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR51I1Q9H343 314 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PELI2Q9HAT8 420 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PLEKHA1Q9HB21 404 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 KLHL1Q9NR64 748 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TAS2R8Q9NYW2 309 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TAS2R5Q9NYW4 299 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 HS3ST2Q9Y278 367 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 KCNMB2Q9Y691 235 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PLSCR5A0PG75 271 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF879B4DU55 563 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SH3BGRLO75368 114 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 GJB5O95377 273 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 MPC2O95563 127 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RPN2P04844 631 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 KLK1P06870 262 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 NPPBP16860 134 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SSTR2P30874 369 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RGS8P57771 180 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RGS7BPQ6MZT1 257 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 C22orf39Q6P5X5 142 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ARL9Q6T311 187 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 LCTLQ6UWM7 567 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OVCH1Q7RTY7 1134 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 TMEM17Q86X19 198 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PCSK9Q8NBP7 692 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 OR5M9Q8NGP3 310 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 BRIX1Q8TDN6 353 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 SPRYD4Q8WW59 207 aaPredicted RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 BRI3BPQ8WY22 251 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RAB8BQ92930 207 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ALG14Q96F25 216 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 LRIG1Q96JA1 1093 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 WDR26Q9H7D7 661 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 BRD7Q9NPI1 651 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 DOCK5Q9H7D0 1870 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 MCRIP1C9JLW8 97 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 APOC3P02656 99 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CD3GP09693 182 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 RAB40ALP0C0E4 278 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 MAOBP27338 520 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 MNDAP41218 407 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 EPHA5P54756 1037 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 ARHGAP19Q14CB8 494 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 UBXN2BQ14CS0 331 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 PUS10Q3MIT2 529 aaKnown RBP4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CYP27C1Q4G0S4 372 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 MORN1Q5T089 497 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CFAP77Q6ZQR2 320 aa4.48□□□□□ -1.69
PTPN13-201ENST00000316707 CPOQ8IVL8 374 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms