RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 FAM76BQ5HYJ3 339 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TOR1AIP1Q5JTV8 583 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 LCN1P1Q5VSP4 162 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 C4orf22Q6V702 233 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 CENPUQ71F23 418 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 STRADAQ7RTN6 431 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 PSTKQ8IV42 348 aaKnown RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 METTL27Q8N6F8 245 aaPredicted RBP3.55□□□□□ -1.84
SMCO3-201ENST00000316048 STPG4Q8N801 248 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TRPV3Q8NET8 790 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 CD99L2Q8TCZ2 262 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TM9SF4Q92544 642 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 BPIFA2Q96DR5 249 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TTC25Q96NG3 672 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SERPINB12Q96P63 405 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SYT15Q9BQS2 421 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 ACBD6Q9BR61 282 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TMEM121Q9BTD3 319 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 FTHL17Q9BXU8 183 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 ATP13A3Q9H7F0 1226 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 RGS18Q9NS28 235 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 PIGVQ9NUD9 493 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 DCAF16Q9NXF7 216 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 SUN2Q9UH99 717 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 TBK1Q9UHD2 729 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 PILRAQ9UKJ1 303 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 POMT2Q9UKY4 750 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 ETV7Q9Y603 341 aa3.55□□□□□ -1.84
SMCO3-201ENST00000316048 GRIN2DO15399 1336 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 TRBV2A0A0J9YWF9 115 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 CFAP73A6NFT4 308 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 H7C0C1 242 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ADAM12O43184 909 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 TRAPPC3O43617 180 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 SHOX2O60902 331 aaPredicted RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 GLRA3O75311 464 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ATP6V1G1O75348 118 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 TRMUO75648 421 aaKnown RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ZNF189O75820 626 aaPredicted RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 CDK2AP2O75956 126 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 AGTP01019 485 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 YES1P07947 543 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 CD48P09326 243 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 PHBP35232 272 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 MDH1P40925 334 aaKnown RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 MAGEA4P43358 317 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ATP5OP48047 213 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 TRPC1P48995 793 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 SULT1E1P49888 294 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 TKTL1P51854 596 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 AIF1P55008 147 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ERVFC1-1P60608 527 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 MAGOHP61326 146 aaKnown RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 GNGT1P63211 74 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ADIGQ0VDE8 80 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 PPP1R8Q12972 351 aaKnown RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 XRCC4Q13426 336 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 RBBP5Q15291 538 aaKnown RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 CEBPEQ15744 281 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 LRRC37A5PQ49AS3 106 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 UNC5DQ6UXZ4 953 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 MACC1Q6ZN28 852 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 CLEC20AQ6ZU45 233 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 LCA5Q86VQ0 697 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ECHDC2Q86YB7 292 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 SAMD14Q8IZD0 417 aaPredicted RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 DEFB106AQ8N104 65 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 FBXW8Q8N3Y1 598 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ESAMQ96AP7 390 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 MRPL53Q96EL3 112 aaKnown RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 CFAP36Q96G28 342 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 SMARCD1Q96GM5 515 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 THOC3Q96J01 351 aaKnown RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 C10orf90Q96M02 699 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 NECTIN4Q96NY8 510 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ZNF670Q9BS34 389 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 WACQ9BTA9 647 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 TRIM62Q9BVG3 475 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 SIRPDQ9H106 197 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 CDC42EP4Q9H3Q1 356 aaKnown RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 DHX35Q9H5Z1 703 aaKnown RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ZDHHC6Q9H6R6 413 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 ZNF665Q9H7R5 613 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 DCLRE1BQ9H816 532 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 POPDC2Q9HBU9 364 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 FAM118AQ9NWS6 357 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 C19orf25Q9UFG5 118 aaPredicted RBP3.54□□□□□ -1.84
SMCO3-201ENST00000316048 SATB2Q9UPW6 733 aa3.54□□□□□ -1.84
SMCO3-201ENST00000316048 A0A087WUV0 522 aaPredicted RBP3.53□□□□□ -1.84
SMCO3-201ENST00000316048 A0A0U1RRA0 63 aa3.53□□□□□ -1.84
SMCO3-201ENST00000316048 BCLAF3A2AJT9 711 aaKnown RBP3.53□□□□□ -1.84
SMCO3-201ENST00000316048 MYBPHLA2RUH7 354 aa3.53□□□□□ -1.84
SMCO3-201ENST00000316048 A8MVM7 634 aa3.53□□□□□ -1.84
SMCO3-201ENST00000316048 M0R296 226 aa3.53□□□□□ -1.84
SMCO3-201ENST00000316048 CLDN5O00501 218 aa3.53□□□□□ -1.84
SMCO3-201ENST00000316048 ALOX15BO15296 676 aa3.53□□□□□ -1.84
SMCO3-201ENST00000316048 EIF3HO15372 352 aaKnown RBP eCLIP3.53□□□□□ -1.84
SMCO3-201ENST00000316048 HCRTO43612 131 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms