RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 KIAA0513O60268 411 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 NKX2-2O95096 273 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 DBIP07108 87 aaKnown RBP17.07■□□□□ 0.32
CCDC43-201ENST00000315286 IFNA8P32881 189 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 ZNF136P52737 540 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 SNRPGP62308 76 aaKnown RBP17.07■□□□□ 0.32
CCDC43-201ENST00000315286 TCTE1Q5JU00 501 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 TSSK4Q6SA08 328 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 CASP12Q6UXS9 341 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 ZNF730Q6ZMV8 503 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 GDF7Q7Z4P5 450 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 STX19Q8N4C7 294 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 HOXB13Q92826 284 aaPredicted RBP17.07■□□□□ 0.32
CCDC43-201ENST00000315286 AHCYL2Q96HN2 611 aaKnown RBP17.07■□□□□ 0.32
CCDC43-201ENST00000315286 CHRNA10Q9GZZ6 450 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 ANKRD19PQ9H560 264 aa17.07■□□□□ 0.32
CCDC43-201ENST00000315286 CLDN4O14493 209 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 BRINP1O60477 761 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 FOXD2O60548 495 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-201ENST00000315286 COQ9O75208 318 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 ENTPD6O75354 484 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 ATXN8OSP0DMR3 200 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 MYF5P13349 255 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 SSTR4P31391 388 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 EMDP50402 254 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 IGLV3-21P80748 117 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-201ENST00000315286 PSG6Q00889 435 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 SPCS2Q15005 226 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 EIPR1Q53HC9 387 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 ZAR1Q86SH2 424 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 KIF18BQ86Y91 864 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 GNPDA2Q8TDQ7 276 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 SLC41A3Q96GZ6 507 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 CD180Q99467 661 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC43-201ENST00000315286 RP1P56715 2156 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 IGHV1OR21-1A0A087WYE8 117 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 FITM1A5D6W6 292 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 OR5F1O95221 314 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 AK1P00568 194 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 GIMD1P0DJR0 217 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 PRG2P13727 222 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 NID1P14543 1247 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 GSTM3P21266 225 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 MAOAP21397 527 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 STT3AP46977 705 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 GIPRP48546 466 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 SEPHS1P49903 392 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 MLLT1Q03111 559 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-201ENST00000315286 CFHR1Q03591 330 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 OCA2Q04671 838 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 GINS1Q14691 196 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 TBCEQ15813 527 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-201ENST00000315286 AMZ1Q400G9 498 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 MRPL2Q5T653 305 aaKnown RBP17.06■□□□□ 0.32
CCDC43-201ENST00000315286 RRM2BQ7LG56 351 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 SLC35F3Q8IY50 421 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 UBALD2Q8IYN6 164 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 TCEANCQ8N8B7 351 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 OR51Q1Q8NH59 317 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 TRUB1Q8WWH5 349 aaKnown RBP17.06■□□□□ 0.32
CCDC43-201ENST00000315286 FOLH1BQ9HBA9 442 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 SLC25A19Q9HC21 320 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 TVP23BQ9NYZ1 205 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 CNIH4Q9P003 139 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 SPEGQ15772 3267 aa17.06■□□□□ 0.32
CCDC43-201ENST00000315286 CACNA1EQ15878 2313 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 BLACEA4D250 179 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 NUDT21O43809 227 aaKnown RBP17.05■□□□□ 0.32
CCDC43-201ENST00000315286 KCNK2O95069 426 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 GABARAPO95166 117 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 ADRA2AP08913 450 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 GKN3PP0CG01 181 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 IFNGR2P38484 337 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 OMPP47874 163 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 DECR1Q16698 335 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 ACSM5Q6NUN0 579 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 LSRQ86X29 649 aaPredicted RBP17.05■□□□□ 0.32
CCDC43-201ENST00000315286 ADAMTS18Q8TE60 1221 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 ACOT11Q8WXI4 607 aaPredicted RBP17.05■□□□□ 0.32
CCDC43-201ENST00000315286 FCGR1BQ92637 280 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 FAM46AQ96IP4 442 aaKnown RBP17.05■□□□□ 0.32
CCDC43-201ENST00000315286 DGAT2Q96PD7 388 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 PLA2G12AQ9BZM1 189 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 EGLN3Q9H6Z9 239 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 DNAJC27Q9NZQ0 273 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 MAU2Q9Y6X3 613 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 CDHR4A6H8M9 788 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 EFCAB10A6NFE3 127 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 BCL10O95999 233 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 CD1CP29017 333 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 SLC15A1P46059 708 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 RFX3P48380 749 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 CDK5Q00535 292 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 ZNF267Q14586 743 aaPredicted RBP17.05■□□□□ 0.32
CCDC43-201ENST00000315286 GRM7Q14831 915 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 Q8N9G6 341 aaPredicted RBP17.05■□□□□ 0.32
CCDC43-201ENST00000315286 OR4N2Q8NGD1 307 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 OR8J1Q8NGP2 316 aa17.05■□□□□ 0.32
CCDC43-201ENST00000315286 TMEM255BQ8WV15 326 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms