RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 CLDN24A6NM45 220 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 PEX12O00623 359 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 SCRG1O75711 98 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 HBQ1P09105 142 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 CT45A8P0DMV1 189 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 CT45A9P0DMV2 189 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 CRHBPP24387 322 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 RORAP35398 523 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 ESRRGP62508 458 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 TRA2AQ13595 282 aaKnown RBP eCLIP15.51■□□□□ 0.07
CLCF1-201ENST00000312438 ELAVL1Q15717 326 aaKnown RBP15.51■□□□□ 0.07
CLCF1-201ENST00000312438 CT45A2Q5DJT8 189 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 PHF19Q5T6S3 580 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 SLITRK4Q8IW52 837 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 PLPP5Q8NEB5 264 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 OR4N2Q8NGD1 307 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 SLC38A4Q969I6 547 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 MCHR1Q99705 422 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 DGCR6LQ9BY27 220 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 UCK2Q9BZX2 261 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 ANKRD19PQ9H560 264 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 MAN2C1Q9NTJ4 1040 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 BLOC1S6Q9UL45 172 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 MKL2Q9ULH7 1088 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 CFL2Q9Y281 166 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 PCDHGB2Q9Y5G2 931 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 ZDBF2Q9HCK1 2354 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 VCANP13611 3396 aa15.51■□□□□ 0.07
CLCF1-201ENST00000312438 CENPVL1A0A0U1RR11 272 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 SMIM31A0A1B0GVY4 71 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CDHR4A6H8M9 788 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 LDOC1O95751 146 aaPredicted RBP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CLPSP04118 112 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 GGT2P36268 569 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 GRK6P43250 576 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 RFX3P48380 749 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 NUP107P57740 925 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CXCR4P61073 352 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 TARDBPQ13148 414 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 TRAM2Q15035 370 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 ENTPD8Q5MY95 495 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 PWWP2BQ6NUJ5 590 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 PGBD2Q6P3X8 592 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 KLHL17Q6TDP4 642 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 NPSR1Q6W5P4 371 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 PRR23CQ6ZRP0 262 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 SATL1Q86VE3 508 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 PPP1R3BQ86XI6 285 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 DIO2Q92813 273 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 DAZLQ92904 295 aaKnown RBP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CLIP3Q96DZ5 547 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 SLC46A1Q96NT5 459 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 PRR14Q9BWN1 585 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 POLR2J2Q9GZM3 115 aaKnown RBP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 POLR2J3Q9H1A7 115 aaKnown RBP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CTPS2Q9NRF8 586 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 SLC22A11Q9NSA0 550 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 SIDT1Q9NXL6 827 aaKnown RBP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CBLCQ9ULV8 474 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 PCDHGA6Q9Y5G7 932 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 IGLV3-12A0A075B6K2 115 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 NPIPA5A0A0B4J1W7 369 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CPSF4LA6NMK7 179 aaKnown RBP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 A8MUA0 341 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 NPIPA7E9PJI5 369 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 OR5F1O95221 314 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CCDC159P0C7I6 412 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 NPIPA8P0DM63 369 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 EEF1B2P24534 225 aaKnown RBP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CSTF2P33240 577 aaKnown RBP eCLIP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 CRISP1P54107 249 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 UGT2B15P54855 530 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 SLC37A1P57057 533 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 OCA2Q04671 838 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 COX10Q12887 443 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 NKAIN1Q4KMZ8 207 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 MRPL2Q5T653 305 aaKnown RBP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 LAIR2Q6ISS4 152 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 COX15Q7KZN9 410 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 ZAR1Q86SH2 424 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 LAPTM4BQ86VI4 370 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 RANBP3LQ86VV4 465 aaPredicted RBP15.5■□□□□ 0.07
CLCF1-201ENST00000312438 SLC38A9Q8NBW4 561 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 TOR1AIP2Q8NFQ8 470 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 OR4K5Q8NGD3 323 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 ART5Q96L15 291 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 ITPAQ9BY32 194 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 VN1R1Q9GZP7 353 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 SEMA4GQ9NTN9 838 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 OR10H1Q9Y4A9 318 aa15.5■□□□□ 0.07
CLCF1-201ENST00000312438 PI4KAP42356 2102 aa15.49■□□□□ 0.07
CLCF1-201ENST00000312438 ASXL3Q9C0F0 2248 aa15.49■□□□□ 0.07
CLCF1-201ENST00000312438 D6RAR5 112 aa15.49■□□□□ 0.07
CLCF1-201ENST00000312438 AGRPO00253 132 aa15.49■□□□□ 0.07
CLCF1-201ENST00000312438 TIAF1O95411 115 aa15.49■□□□□ 0.07
CLCF1-201ENST00000312438 ONECUT2O95948 504 aa15.49■□□□□ 0.07
CLCF1-201ENST00000312438 IGKV1D-16P01601 117 aa15.49■□□□□ 0.07
CLCF1-201ENST00000312438 GP1BAP07359 652 aa15.49■□□□□ 0.07
CLCF1-201ENST00000312438 OSMP13725 252 aa15.49■□□□□ 0.07
CLCF1-201ENST00000312438 AGXTP21549 392 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms