RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLC28A3Q9HAS3 691 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 CD93Q9NPY3 652 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 UBQLN2Q9UHD9 624 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 REV3LO60673 3130 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 A0A1W2PQU0 124 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 PROM1O43490 865 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 PRKYO43930 277 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 RFPL3O75679 317 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 GRPRP30550 384 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 AHRP35869 848 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 NAA10P41227 235 aaPredicted RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 ANXA11P50995 505 aaKnown RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 RRAS2P62070 204 aaPredicted RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 IRF3Q14653 427 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 LCN9Q8WX39 176 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 THAP7Q9BT49 309 aaPredicted RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 ARL6Q9H0F7 186 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 RASD1Q9Y272 281 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 PLPP1O14494 284 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ARPC5O15511 151 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 SOX30O94993 753 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 GNSP15586 552 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 PRLHRP49683 370 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 CRYZQ08257 329 aaKnown RBP11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ELAVL3Q14576 367 aaKnown RBP11.9□□□□□ -0.5
RETREG3-201ENST00000309428 NDUFAF5Q5TEU4 345 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 FAM46CQ5VWP2 391 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 PGBD2Q6P3X8 592 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 FRRS1Q6ZNA5 592 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 RAB42Q8N4Z0 105 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ANKK1Q8NFD2 765 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 WDR20Q8TBZ3 569 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 SLC38A5Q8WUX1 472 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ST8SIA2Q92186 375 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ECHDC3Q96DC8 303 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 OTUB2Q96DC9 234 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 HHATLQ9HCP6 504 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 RBFOX1Q9NWB1 397 aaKnown RBP11.9□□□□□ -0.5
RETREG3-201ENST00000309428 PATJQ8NI35 1801 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF670-ZNF695F2Z2N8 137 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 TMPRSS11DO60235 418 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 SLCO2B1O94956 709 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 NFATC1O95644 943 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 MPC1LP0DKB6 136 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 POLR2CP19387 275 aaPredicted RBP11.9□□□□□ -0.5
RETREG3-201ENST00000309428 PCGF2P35227 344 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ETV5P41161 510 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ETV1P50549 477 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 GALEQ14376 348 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 SSX1Q16384 188 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 PODNL1Q6PEZ8 512 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 UNC5DQ6UXZ4 953 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 TMED4Q7Z7H5 227 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 CCDC190Q86UF4 302 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 SPERTQ8NA61 448 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 SPRYD4Q8WW59 207 aaPredicted RBP11.9□□□□□ -0.5
RETREG3-201ENST00000309428 TESCQ96BS2 214 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF689Q96CS4 500 aaPredicted RBP11.9□□□□□ -0.5
RETREG3-201ENST00000309428 ZG16BQ96DA0 208 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 RAD9AQ99638 391 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 DIABLOQ9NR28 239 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 THSD1Q9NS62 852 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 MGAT4CQ9UBM8 478 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 IKZF2Q9UKS7 526 aa11.9□□□□□ -0.5
RETREG3-201ENST00000309428 KCNE1BA0A087WTH5 132 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 OR6C74A6NCV1 312 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 MOSPD3O75425 235 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 SCG5P05408 212 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 ZNF250P15622 560 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 IL1RNP18510 177 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 GIPRP48546 466 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 GZMKP49863 264 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 TFF2Q03403 129 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 DSG2Q14126 1118 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 ESCO2Q56NI9 601 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 TOR2AQ5JU69 321 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 C6orf132Q5T0Z8 1188 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 MPP7Q5T2T1 576 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 ELP2Q6IA86 826 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 PLCZ1Q86YW0 608 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 CPOQ8IVL8 374 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 ZNF566Q969W8 418 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 ZBED6CLQ96FA7 236 aaPredicted RBP11.9□□□□□ -0.51
RETREG3-201ENST00000309428 SPATA5L1Q9BVQ7 753 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 FAIM2Q9BWQ8 316 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 CPEB1Q9BZB8 566 aaKnown RBP11.9□□□□□ -0.51
RETREG3-201ENST00000309428 MRPS30Q9NP92 439 aaKnown RBP11.9□□□□□ -0.51
RETREG3-201ENST00000309428 MLXQ9UH92 298 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 BTNL2Q9UIR0 455 aa11.9□□□□□ -0.51
RETREG3-201ENST00000309428 ARHGEF17Q96PE2 2063 aaPredicted RBP11.89□□□□□ -0.51
RETREG3-201ENST00000309428 ERVH48-1M5A8F1 160 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 LAMP2P13473 410 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 GCGRP47871 477 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 FAM27D1Q5T7N8 215 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 SYNPOQ8N3V7 929 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 OR8S1Q8NH09 359 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 RPLP0P6Q8NHW5 317 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 MRGPRX3Q96LB0 322 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 SRRQ9GZT4 340 aa11.89□□□□□ -0.51
RETREG3-201ENST00000309428 METTL17Q9H7H0 456 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms