RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ABOP16442 354 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 LSP1P33241 339 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 GCKP35557 465 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 UQCRFS1P47985 274 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 CASP9P55211 416 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 FOXO1Q12778 655 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 STX5Q13190 355 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 MAPRE2Q15555 327 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 HYAL4Q2M3T9 481 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 GRAMD1BQ3KR37 738 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 FLYWCH1Q4VC44 716 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 EXOSC6Q5RKV6 272 aaKnown RBP10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 SLC2A7Q6PXP3 512 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 CPLX4Q7Z7G2 160 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 RNF130Q86XS8 419 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 SIAH3Q8IW03 269 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ZNF614Q8N883 585 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 OR4K17Q8NGC6 315 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 OR52N2Q8NGI0 321 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 PRR7Q8TB68 274 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 PNPT1Q8TCS8 783 aaKnown RBP10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 MIPOL1Q8TD10 442 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 C10orf82Q8WW14 230 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 XAGE5Q8WWM1 108 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 DEFB127Q9H1M4 99 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 RAD21L1Q9H4I0 556 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ZDHHC11Q9H8X9 412 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 PROK2Q9HC23 129 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 SERHLQ9NQF3 203 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 C15orf41Q9Y2V0 281 aa10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 SPENQ96T58 3664 aaKnown RBP10.06□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ARHGAP21Q5T5U3 1957 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 A0A096LPI6 279 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 A0A1W2PP18 115 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 GMNCA6NCL1 334 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 C2orf72A6NCS6 295 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 TMEM247A6NEH6 219 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 H3BNH8 94 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 STX11O75558 287 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 TRAPPC6AO75865 159 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 PDE9AO76083 593 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 OXSR1O95747 527 aaPredicted RBP10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 IGKV1D-16P01601 117 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 CAPN3P20807 821 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 PPIBP23284 216 aaKnown RBP10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 DCTP40126 519 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 PTGDSP41222 190 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 CRATP43155 626 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 MAGEA8P43361 318 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 MAN2A2P49641 1150 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 GYS2P54840 703 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 KCNC4Q03721 635 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 SLC10A1Q14973 349 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ARHGAP11BQ3KRB8 267 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 MMEL1Q495T6 779 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 GPAT3Q53EU6 434 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 CMPK2Q5EBM0 449 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 TIGD3Q6B0B8 471 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ARHGAP11AQ6P4F7 1023 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 SPATA21Q7Z572 469 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 PLCZ1Q86YW0 608 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 FUNDC1Q8IVP5 155 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 MISPQ8IVT2 679 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 CHDHQ8NE62 594 aaPredicted RBP10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 FAM110BQ8TC76 370 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ZFP90Q8TF47 636 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 TSPEARQ8WU66 669 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 GTF2H4Q92759 462 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ELAC2Q9BQ52 826 aaKnown RBP10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 HOXD1Q9GZZ0 328 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 SERHL2Q9H4I8 314 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ZNF385DQ9H6B1 395 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 TPT1P8Q9HAU6 139 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 UBQLN4Q9NRR5 601 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 P2RX2Q9UBL9 471 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 DKKL1Q9UK85 242 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 NDUFAF1Q9Y375 327 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 PCNX3Q9H6A9 2034 aa10.05□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 TRGV5A0A0B4J1U4 118 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 NDUFB5O43674 189 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 HCN1O60741 890 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 CCDC22O60826 627 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 CBR3O75828 277 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ANGPTL1O95841 491 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 NGFRP08138 427 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 SNRPB2P08579 225 aaKnown RBP10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 TBXA2RP21731 343 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 PTPN6P29350 595 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 SEC24CP53992 1094 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 HSF1Q00613 529 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 C17orf67Q0P5P2 114 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 UBAP2LQ14157 1087 aaKnown RBP10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 GPR68Q15743 365 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 EIF2S3LQ2VIR3 472 aaKnown RBP10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 GTDC1Q4AE62 458 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 DHDDSQ86SQ9 333 aa10.04□□□□□ -0.8
CSPG4P1Y-201ENST00000306641 EID3Q8N140 333 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms