RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 DCDP81605 110 aaKnown RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 FGL1Q08830 312 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 ODF4Q2M2E3 257 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TMEM52BQ4KMG9 183 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 UBE2Q1Q7Z7E8 422 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 PBDC1Q9BVG4 233 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 AKTIPQ9H8T0 292 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 GIN1Q9NXP7 522 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 B3GNT2Q9NY97 397 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 AJAP1Q9UKB5 411 aaPredicted RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 PADI1Q9ULC6 663 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 MAGED1Q9Y5V3 778 aaPredicted RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 LSM1O15116 133 aaKnown RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 SEC14L5O43304 696 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 SSX5O60225 188 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 PIP5K1CO60331 668 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 CNOT4O95628 575 aaKnown RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 CSF2P04141 144 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 NDUFV2P19404 249 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 CLCN2P51788 898 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 EMP2P54851 167 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 ROR2Q01974 943 aaKnown RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 ZNF169Q14929 603 aaPredicted RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TECRLQ5HYJ1 363 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 GALNT10Q86SR1 603 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 AGAP11Q8TF27 550 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 ZIC5Q96T25 663 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 CGREF1Q99674 301 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 HCAR1Q9BXC0 346 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 ZBTB26Q9HCK0 441 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 PRMT8Q9NR22 394 aaPredicted RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 FRMPD3Q5JV73 1810 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 SLC35F1Q5T1Q4 408 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 POGLUT1Q8NBL1 392 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TMEM178AQ8NBL3 297 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 SHISA4Q96DD7 197 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 ASB9Q96DX5 294 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 L3HYPDHQ96EM0 354 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TMEM80Q96HE8 168 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 ATG5Q9H1Y0 275 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 SMOXQ9NWM0 555 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 FAM118AQ9NWS6 357 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 MGAT4CQ9UBM8 478 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TCF20Q9UGU0 1960 aaKnown RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 WNK2Q9Y3S1 2297 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 LTBP1Q14766 1721 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 NSG1A0A0A6YYJ2 146 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 CCDC163A0A0D9SF12 145 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 SLC9B1P1A6NJY1 282 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 A8MXE2 369 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 MSL3P1P0C860 447 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 PRKCAP17252 672 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TUBA1BP68363 451 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 GRIN2CQ14957 1233 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 BCL2L15Q5TBC7 163 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TUBA1AQ71U36 451 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TRIM46Q7Z4K8 759 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 SNX29P2Q8IUI4 249 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 KLHDC8AQ8IYD2 350 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 METTL27Q8N6F8 245 aaPredicted RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 CASTOR1Q8WTX7 329 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 LMF2Q9BU23 707 aaKnown RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 NANSQ9NR45 359 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 MMACHCQ9Y4U1 282 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 CD36P16671 472 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TEAD1P28347 426 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 MADCAM1Q13477 382 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 FBXO48Q5FWF7 155 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 TTLL10Q6ZVT0 673 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 MRPL21Q7Z2W9 205 aaKnown RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 GLYATL2Q8WU03 294 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 MVB12AQ96EY5 273 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 AGPAT4Q9NRZ5 378 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 SLC19A2O60779 497 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 FAM155BO75949 473 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 PSMA6P60900 246 aaKnown RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 ACSBG2Q5FVE4 666 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 C6orf52Q5T4I8 152 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 NPWQ8N729 165 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 CDRT4Q8N9R6 151 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 PRR11Q96HE9 360 aaPredicted RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 RNF38Q9H0F5 515 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 RGCCQ9H4X1 137 aa7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 GPN2Q9H9Y4 310 aaPredicted RBP7.88□□□□□ -1.15
PCDHB1-201ENST00000306549 STK17BO94768 372 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 LCN1P31025 176 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 MSX2P35548 267 aaPredicted RBP7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 RAB4BP61018 213 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 MAB21L1Q13394 359 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 VWA5B1Q5TIE3 1220 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 TXNRD3NBQ6F5E7 133 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 DPY19L4Q7Z388 723 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 COMTD1Q86VU5 262 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 CNTN4Q8IWV2 1026 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 UEVLDQ8IX04 471 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 THAP3Q8WTV1 239 aaPredicted RBP7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 TBC1D20Q96BZ9 403 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 IL4I1Q96RQ9 567 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 MCHR1Q99705 422 aa7.87□□□□□ -1.15
PCDHB1-201ENST00000306549 OR51I1Q9H343 314 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms