RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KLHL31Q9H511 634 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 EMC3Q9P0I2 261 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 OAZ3Q9UMX2 235 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 MRPS7Q9Y2R9 242 aaKnown RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CAB39Q9Y376 341 aaPredicted RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 HRO43593 1189 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 ITIH1P19827 911 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 OMPP47874 163 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 GBX2P52951 348 aaPredicted RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 LTB4RQ15722 352 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 C11orf88Q6PI97 169 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 SPATC1Q76KD6 591 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CRIPAKQ8N1N5 446 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 DUSP19Q8WTR2 217 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 COX14Q96I36 57 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 TNFRSF10DQ9UBN6 386 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 RIF1Q5UIP0 2472 aaKnown RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 ASXL3Q9C0F0 2248 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 ARHGEF9O43307 516 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 OPN1LWP04000 364 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 TACR1P25103 407 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 DPP4P27487 766 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 MAGEA8P43361 318 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 HBA1P69905 142 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 RIN1Q13671 783 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 DSG2Q14126 1118 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 STK11Q15831 433 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 NDUFAF6Q330K2 333 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 ARL9Q6T311 187 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 HACD2Q6Y1H2 254 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 MISPQ8IVT2 679 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 FOLH1BQ9HBA9 442 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 EIF3KQ9UBQ5 218 aaKnown RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CENPXA8MT69 81 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CRYABP02511 175 aaKnown RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 TTKP33981 857 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 SLC6A12P48065 614 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 SLC14A1Q13336 389 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 SLC36A3Q495N2 470 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 ARMCX4Q5H9R4 360 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CYHR1Q6ZMK1 362 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 ABHD12BQ7Z5M8 362 aaPredicted RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 YIPF7Q8N8F6 280 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 ABTB1Q969K4 478 aaPredicted RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 SLC41A3Q96GZ6 507 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CLMPQ9H6B4 373 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 CARD8Q9Y2G2 431 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 KLF13Q9Y2Y9 288 aaPredicted RBP8.66□□□□□ -1.02
PTPRE-202ENST00000306042 SPTBN2O15020 2390 aa8.66□□□□□ -1.02
PTPRE-202ENST00000306042 IGLV3-16A0A075B6K0 115 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF264O43296 627 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 TLX2O43763 284 aaPredicted RBP8.65□□□□□ -1.02
PTPRE-202ENST00000306042 PFDN1O60925 122 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 FMO3P31513 532 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 C17orf67Q0P5P2 114 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 TRIM46Q7Z4K8 759 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 LAPTM4BQ86VI4 370 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 MMP21Q8N119 569 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 CARFQ8N187 725 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 ZNF283Q8N7M2 679 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 OR2T33Q8NG76 320 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 OR6N2Q8NGY6 317 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 PINK1Q9BXM7 581 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 GPR45Q9Y5Y3 372 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 IGHV5-51A0A0C4DH38 117 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 PRRG2O14669 202 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 PGRMC2O15173 223 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 CASC3O15234 703 aaKnown RBP8.65□□□□□ -1.02
PTPRE-202ENST00000306042 LCMT2O60294 686 aaKnown RBP8.65□□□□□ -1.02
PTPRE-202ENST00000306042 RPP14O95059 124 aaKnown RBP8.65□□□□□ -1.02
PTPRE-202ENST00000306042 SPARCP09486 303 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 RCVRNP35243 200 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 CAPGP40121 348 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 FASLGP48023 281 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 CDH11P55287 796 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 KCNJ10P78508 379 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 OR7A5Q15622 319 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 MED25Q71SY5 747 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 OR8H2Q8N162 312 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 COQ10BQ9H8M1 238 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 SP140LQ9H930 580 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 LAMP5Q9UJQ1 280 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 SPEF1Q9Y4P9 236 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 GXYLT2A0PJZ3 443 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 SOCS2O14508 198 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 FURINP09958 794 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 GKN3PP0CG01 181 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 MAN2A2P49641 1150 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 LAPTM4AQ15012 233 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 PAGE3Q5JUK9 113 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 ARMC4Q5T2S8 1044 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 TRIQKQ629K1 86 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 FRMPD2BQ6IN97 320 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 PRICKLE2Q7Z3G6 844 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 ANKFN1Q8N957 763 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 ABHD11Q8NFV4 315 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 KBTBD8Q8NFY9 601 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 NRSN2Q9GZP1 204 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 C15orf41Q9Y2V0 281 aa8.65□□□□□ -1.02
PTPRE-202ENST00000306042 CNOT1A5YKK6 2376 aaKnown RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms