RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 FCAMRQ8WWV6 532 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 TMPRSS11EQ9UL52 423 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 DNAJC25-GNG10A0A024R161 153 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 A0A1W2PP18 115 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 H3BSA7 217 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 K7ESM1 405 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 PPP6CO00743 305 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 HSD11B2P80365 405 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 TMEM176BQ3YBM2 270 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 OR52W1Q6IF63 320 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 FAM111BQ6SJ93 734 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 YRDCQ86U90 279 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 GLB1L2Q8IW92 636 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 PHB2Q99623 299 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 EDEM2Q9BV94 578 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 NALCNQ8IZF0 1738 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 PIK3C2AO00443 1686 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 FAM183AA6NL82 134 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 MATN2O00339 956 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ZIC2O95409 532 aaPredicted RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 CCR7P32248 378 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 PIK3CBP42338 1070 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 NFATC4Q14934 902 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 UGT3A2Q3SY77 523 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 C1orf220Q5T0J3 134 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 LRIG1Q96JA1 1093 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 PRR14Q9BWN1 585 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 KLK10O43240 276 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 UBL4AP11441 157 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 CBLBQ13191 982 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 EIF4HQ15056 248 aaKnown RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 P2RY14Q15391 338 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 SFT2D3Q587I9 215 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 PLEKHG7Q6ZR37 379 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 THAP6Q8TBB0 222 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 KCND1Q9NSA2 647 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 SLC7A8Q9UHI5 535 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 NENFQ9UMX5 172 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 MPIG6BO95866 241 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 BMP4P12644 408 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 FUT1P19526 365 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 PTPN6P29350 595 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 SLC5A2P31639 672 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 TGM4P49221 684 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 CYP1B1Q16678 543 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF783Q6ZMS7 281 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 PIANPQ8IYJ0 282 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 IL17RDQ8NFM7 739 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 OR5M9Q8NGP3 310 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ITFG2Q969R8 447 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 CREB3L1Q96BA8 519 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 DTD2Q96FN9 168 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 PDXPQ96GD0 296 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ERVK13-1Q9NX77 482 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 LGALS13Q9UHV8 139 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 DUOX1Q9NRD9 1551 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF142P52746 1687 aaPredicted RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 M0QZQ0 153 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 FLRT2O43155 660 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 NPR2P20594 1047 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 MAGEA6P43360 314 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 AFF3P51826 1226 aaKnown RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 FAM57BQ71RH2 274 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ZADH2Q8N4Q0 377 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 NELFAQ9H3P2 528 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF223Q9UK11 482 aaPredicted RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 MRPL33O75394 65 aaKnown RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 HOXD9P28356 352 aaPredicted RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 PRDX6P30041 224 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 CSNK1A1P48729 337 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 C18orf63Q68DL7 685 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 VASNQ6EMK4 673 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 RTN4RL1Q86UN2 441 aaPredicted RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 SLC22A16Q86VW1 577 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 OR6C4Q8NGE1 309 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF675Q8TD23 568 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 LKAAEAR1Q8TD35 194 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 MRPL38Q96DV4 380 aaKnown RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ACTRT3Q9BYD9 372 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 POLHQ9Y253 713 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 EFSO43281 561 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 TMEM69Q5SWH9 247 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 FBXW12Q6X9E4 464 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 MAMDC2Q7Z304 686 aaPredicted RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF584Q8IVC4 421 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ETFBKMTQ8IXQ9 262 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 LIPHQ8WWY8 451 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 LSM5Q9Y4Y9 91 aaKnown RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 UNCXA6NJT0 531 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 CLDN25C9JDP6 229 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 NFYBP25208 207 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 RING1Q06587 406 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 ADAM15Q13444 863 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 TMEM53Q6P2H8 277 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 VWA5B2Q8N398 1253 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 C19orf47Q8N9M1 422 aaKnown RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 WFDC5Q8TCV5 224 aa7.35□□□□□ -1.23
SCN9A-201ENST00000303354 FUBP1Q96AE4 644 aaKnown RBP7.35□□□□□ -1.23
SCN9A-201ENST00000303354 NECAB3Q96P71 396 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms