RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ERCC1P07992 297 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 PREPP48147 710 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 CDKN1CP49918 316 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 VEZF1Q14119 521 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR4D1Q15615 310 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC29A4Q7RTT9 530 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 NRROSQ86YC3 692 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC7A5P1Q8MH63 180 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR4K5Q8NGD3 323 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 LILRB4Q8NHJ6 448 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ELMOD3Q96FG2 381 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ORAI3Q9BRQ5 295 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 EIF5A2Q9GZV4 153 aaKnown RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 NUBP2Q9Y5Y2 271 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 AP1M2Q9Y6Q5 423 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 PIGBOS1A0A0B4J2F0 54 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 M0R129 80 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 EIF3FO00303 357 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 MAFKO60675 156 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ACVR1BP36896 505 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 STK19P49842 368 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SGSHP51688 502 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 NKAPLQ5M9Q1 402 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 WDR5BQ86VZ2 330 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF709Q8N972 641 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 PLA2G15Q8NCC3 412 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR51A7Q8NH64 312 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 RHOXF1Q8NHV9 184 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 TCTEX1D2Q8WW35 142 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ARL11Q969Q4 196 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 FAM122AQ96E09 287 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC5A7Q9GZV3 580 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 PTTG3PQ9NZH4 202 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 EPHA6Q9UF33 1036 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 LOC285095A0A1B0GVY8 99 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 MEIOCA2RUB1 952 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 K7EQS6 105 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 GM2AP17900 193 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 MAGEA6P43360 314 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 PXNP49023 591 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 INAVAQ3KP66 663 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 PLAG1Q6DJT9 500 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SUSD1Q6UWL2 747 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 UNC5DQ6UXZ4 953 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SSX6Q7RTT6 188 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SCGB1C1Q8TD33 95 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 CHPT1Q8WUD6 406 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 PNPLA2Q96AD5 504 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF778Q96MU6 729 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 GABRG3Q99928 467 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 PCED1AQ9H1Q7 454 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 TRAPPC13A5PLN9 417 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 GREM1O60565 184 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 IFNA1P01562 189 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SYPP08247 313 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 CYCSP99999 105 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 TMEM115Q12893 351 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 DOC2AQ14183 400 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 OTUD1Q5VV17 481 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SFRP4Q6FHJ7 346 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 MTFR2Q6P444 385 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 GSG1LQ6UXU4 331 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 MAMSTRQ6ZN01 415 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SNAPC3Q92966 411 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC6A7Q99884 636 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 C7orf50Q9BRJ6 194 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 TTTY10Q9BZA0 68 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 DHDHQ9UQ10 334 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 OTOL1A6NHN0 477 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 WASHC1A8K0Z3 465 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SCAMP2O15127 329 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SEMA4FO95754 770 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 CFIP05156 583 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 HRH2P25021 359 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 RPL35P42766 123 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 PITPNBP48739 271 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 CHRFAM7AQ494W8 412 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 CNIH2Q6PI25 160 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 WASH2PQ6VEQ5 465 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 Q6ZVL8 140 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SPATC1Q76KD6 591 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZFP41Q8N8Y5 198 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 ELP5Q8TE02 316 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 MRI1Q9BV20 369 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 GPR174Q9BXC1 333 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 PRSS16Q9NQE7 514 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 PNO1Q9NRX1 252 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 TEX10Q9NXF1 929 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 ATE1O95260 518 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 AK1P00568 194 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 CD9P21926 228 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 NAA10P41227 235 aaPredicted RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 GPR143P51810 404 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 CDNFQ49AH0 187 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 ALG10BQ5I7T1 473 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 ELP2Q6IA86 826 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 ERN2Q76MJ5 926 aaKnown RBP11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 ADIPOR2Q86V24 386 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 LNX2Q8N448 690 aa11.18□□□□□ -0.62
SYNGAP1-201ENST00000293748 SMPDL3BQ92485 455 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms