RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CA3P07451 260 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 AMY2BP19961 511 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 GNMTQ14749 295 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 IRF4Q15306 451 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF542PQ5EBM4 170 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF704Q6ZNC4 412 aaPredicted RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 Q6ZSR6 202 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 UTP4Q969X6 686 aaKnown RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 TMEM121BQ9BXQ6 578 aaPredicted RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 CD207Q9UJ71 328 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 MYH7BA7E2Y1 1941 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 TTLL8A6PVC2 850 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 HMGN2P05204 90 aaKnown RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 TNFRSF1BP20333 461 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 MAGEA12P43365 314 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 HTR3AP46098 478 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 DAP3P51398 398 aaKnown RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 MRPS10P82664 201 aaKnown RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 CDNFQ49AH0 187 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 NKAPLQ5M9Q1 402 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 SLC15A4Q8N697 577 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 KLHDC9Q8NEP7 349 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 OR8J2Q8NGG1 315 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 ZC3H10Q96K80 434 aaKnown RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF334Q9HCZ1 680 aaPredicted RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 POLE4Q9NR33 117 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 CARD8Q9Y2G2 431 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 HRGP04196 525 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF791Q3KP31 576 aaPredicted RBP12.07□□□□□ -0.48
PTCD1-201ENST00000292478 DCST2Q5T1A1 773 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 FAM69BQ5VUD6 431 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 PGM2L1Q6PCE3 622 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 CPOQ8IVL8 374 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 DPH1Q9BZG8 443 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 FAIMQ9NVQ4 179 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 ERVK13-1Q9NX77 482 aa12.07□□□□□ -0.48
PTCD1-201ENST00000292478 IGLV3-10A0A075B6K4 115 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 AXIN1O15169 862 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 BRINP1O60477 761 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 CD63P08962 238 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 ALDOCP09972 364 aaKnown RBP12.06□□□□□ -0.48
PTCD1-201ENST00000292478 HIST1H1TP22492 207 aaPredicted RBP12.06□□□□□ -0.48
PTCD1-201ENST00000292478 DEFB103AP81534 67 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 SEMA3BQ13214 749 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 IQCF1Q8N6M8 205 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 ZNF417Q8TAU3 575 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 CACNG6Q9BXT2 260 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 SYT4Q9H2B2 425 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 C5AR2Q9P296 337 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 MGAT4CQ9UBM8 478 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 CA14Q9ULX7 337 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 A0A1W2PPK0 400 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 C12orf71A8MTZ7 269 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 HHLA1C9JL84 531 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 CPOXP36551 454 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 HACD4Q5VWC8 232 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 TLDC1Q6P9B6 456 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 TMEM151AQ8N4L1 468 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 OR5W2Q8NH69 310 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 COQ8AQ8NI60 647 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 DIO2Q92813 273 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 HYLS1Q96M11 299 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 PITX2Q99697 317 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 EPHX3Q9H6B9 360 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 TFPTP0C1Z6 253 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 HLA-FP30511 346 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 C1orf189Q5VU69 101 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 C3orf33Q6P1S2 294 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 TMPPEQ6ZT21 453 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 LINC01465Q8N7H1 131 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 L3MBTL4Q8NA19 623 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 POGLUT1Q8NBL1 392 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 BTBD2Q9BX70 525 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 BEX2Q9BXY8 128 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 BEX1Q9HBH7 125 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 IL37Q9NZH6 218 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 GPR52Q9Y2T5 361 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 DIRAS3O95661 229 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 LCKP06239 509 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 ARAFP10398 606 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 TNFRSF4P43489 277 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 MRPS21P82921 87 aaKnown RBP12.06□□□□□ -0.48
PTCD1-201ENST00000292478 CARD17Q5XLA6 110 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 SLC6A19Q695T7 634 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 MFSD9Q8NBP5 474 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 OR5K2Q8NHB8 316 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 CPPED1Q9BRF8 314 aaPredicted RBP12.06□□□□□ -0.48
PTCD1-201ENST00000292478 KCNN3Q9UGI6 736 aa12.06□□□□□ -0.48
PTCD1-201ENST00000292478 A0A1W2PQL4 384 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 PRSS38A1L453 326 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 AGAP5A6NIR3 686 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 FUT1P19526 365 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 THBS2P35442 1172 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 RNF144AP50876 292 aaPredicted RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 PRDX1Q06830 199 aaKnown RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 AIMP2Q13155 320 aaKnown RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 RHEBQ15382 184 aa12.05□□□□□ -0.48
PTCD1-201ENST00000292478 RNASE10Q5GAN6 216 aaKnown RBP12.05□□□□□ -0.48
PTCD1-201ENST00000292478 TMPRSS9Q7Z410 1059 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms