RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 MT-ND4P03905 459 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 HRGP04196 525 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 MSL3P1P0C860 447 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 CTSEP14091 401 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 CPEP16870 476 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 RPL4P36578 427 aaKnown RBP12.59□□□□□ -0.39
SCAF4-201ENST00000286835 CCR6P51684 374 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 CHRNEQ04844 493 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 RNF165Q6ZSG1 346 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 OR2T33Q8NG76 320 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 OSTF1Q92882 214 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 NEURL3Q96EH8 262 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 METTL2AQ96IZ6 378 aaKnown RBP12.59□□□□□ -0.39
SCAF4-201ENST00000286835 DPH1Q9BZG8 443 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
SCAF4-201ENST00000286835 ZSWIM8A7E2V4 1837 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 A0A087WUU8 490 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 IFNA7P01567 189 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 HOXB9P17482 250 aaPredicted RBP12.58□□□□□ -0.4
SCAF4-201ENST00000286835 CSNK2A2P19784 350 aaPredicted RBP12.58□□□□□ -0.4
SCAF4-201ENST00000286835 TRIM23P36406 574 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 SNTB2Q13425 540 aaKnown RBP12.58□□□□□ -0.4
SCAF4-201ENST00000286835 GPR176Q14439 515 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 SIGIRRQ6IA17 410 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 SLC25A25Q6KCM7 469 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.58□□□□□ -0.4
SCAF4-201ENST00000286835 FTMTQ8N4E7 242 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 OR4M1Q8NGD0 313 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 SNX33Q8WV41 574 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 NDC1Q9BTX1 674 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 ALG8Q9BVK2 526 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 SLC35C2Q9NQQ7 365 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 CIB4A0PJX0 185 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 SLC19A2O60779 497 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 CENPAP49450 140 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 DOC2BQ14184 412 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 C3orf38Q5JPI3 329 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 ESPNLQ6ZVH7 1005 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 SERPINA12Q8IW75 414 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 HDDC3Q8N4P3 179 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 NATD1Q8N6N6 113 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 TM4SF18Q96CE8 201 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 CAMK1GQ96NX5 476 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 RBCK1Q9BYM8 510 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 ACOXLQ9NUZ1 547 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 HS3ST2Q9Y278 367 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 CACNG2Q9Y698 323 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 HYAL3O43820 417 aaPredicted RBP12.58□□□□□ -0.4
SCAF4-201ENST00000286835 TRAPPC2P0DI81 140 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 TRAPPC2BP0DI82 140 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 IRS1P35568 1242 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 MC3RP41968 323 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 FAM26EQ8N5C1 309 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 LYSMD1Q96S90 227 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 TAPBPLQ9BX59 468 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 OR51J1Q9H342 316 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 REV1Q9UBZ9 1251 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 AP1M2Q9Y6Q5 423 aa12.58□□□□□ -0.4
SCAF4-201ENST00000286835 SLC5A10A0PJK1 596 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 M0R233 179 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 FOXE1O00358 373 aaPredicted RBP12.57□□□□□ -0.4
SCAF4-201ENST00000286835 NAA10P41227 235 aaPredicted RBP12.57□□□□□ -0.4
SCAF4-201ENST00000286835 PITPNBP48739 271 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 RAB30Q15771 203 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 PRSS53Q2L4Q9 553 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 ASTLQ6HA08 431 aaPredicted RBP12.57□□□□□ -0.4
SCAF4-201ENST00000286835 ZNF613Q6PF04 617 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 LYPD4Q6UWN0 246 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 PARS2Q7L3T8 475 aaKnown RBP12.57□□□□□ -0.4
SCAF4-201ENST00000286835 DCUN1D3Q8IWE4 304 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 LAS2Q8IYD9 372 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 KCT2Q8NC54 265 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 FBXO15Q8NCQ5 510 aaPredicted RBP12.57□□□□□ -0.4
SCAF4-201ENST00000286835 OR4C6Q8NH72 309 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 DNAJA4Q8WW22 397 aaPredicted RBP12.57□□□□□ -0.4
SCAF4-201ENST00000286835 HERVK_113Q902F9 699 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 PRRC1Q96M27 445 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 OR10A4Q9H209 315 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 B3GAT2Q9NPZ5 323 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 TM7SF3Q9NS93 570 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 OR6C2Q9NZP2 312 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 POM121CA8CG34 1229 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 RGS9O75916 674 aaPredicted RBP12.57□□□□□ -0.4
SCAF4-201ENST00000286835 HMGN1P05114 100 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 EVX1P49640 407 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 OR10A3P58181 314 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 SNTA1Q13424 505 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 OCLNQ16625 522 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 ESCO2Q56NI9 601 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 RNF44Q7L0R7 432 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 SLC38A6Q8IZM9 456 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 NUP43Q8NFH3 380 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 OR6K6Q8NGW6 343 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 GINS4Q9BRT9 223 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 CPEB1Q9BZB8 566 aaKnown RBP12.57□□□□□ -0.4
SCAF4-201ENST00000286835 TTYH1Q9H313 450 aaPredicted RBP12.57□□□□□ -0.4
SCAF4-201ENST00000286835 SLC25A19Q9HC21 320 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 GLTPQ9NZD2 209 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 ZNF69Q9UC07 566 aa12.57□□□□□ -0.4
SCAF4-201ENST00000286835 PCDHGB7Q9Y5F8 929 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms