RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ACSM1Q08AH1 577 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 MAB21L1Q13394 359 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 FZD5Q13467 585 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 HNRNPA1L2Q32P51 320 aaKnown RBP12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 TMEM52BQ4KMG9 183 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 FAM209AQ5JX71 171 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 PLPP4Q5VZY2 271 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 C18orf63Q68DL7 685 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 PLEKHM3Q6ZWE6 761 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 DENND4AQ7Z401 1863 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 OR4M1Q8NGD0 313 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 OR51G2Q8NGK0 314 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 WFIKKN2Q8TEU8 576 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 TMEM255BQ8WV15 326 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 FCRL4Q96PJ5 515 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 FERD3LQ96RJ6 166 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 TEX12Q9BXU0 123 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 HINT3Q9NQE9 182 aaKnown RBP12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 ASB6Q9NWX5 421 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 SCN3AQ9NY46 2000 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 PTGFRNQ9P2B2 879 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 TNFRSF10DQ9UBN6 386 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 ENTPD4Q9Y227 616 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 ASB4Q9Y574 426 aa12.39□□□□□ -0.43
SLC28A1-201ENST00000286749 GTPBP1O00178 669 aaKnown RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 AIFM1O95831 613 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 THY1P04216 161 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 STAT5AP42229 794 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 RGS8P57771 180 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 IL20RBQ6UXL0 311 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ZNF620Q6ZNG0 422 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ASB18Q6ZVZ8 466 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 CPOQ8IVL8 374 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 SFTPA1Q8IWL2 248 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 GJD3Q8N144 294 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ACOT4Q8N9L9 421 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ACOT11Q8WXI4 607 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 AKAP1Q92667 903 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 GTPBP2Q9BX10 602 aaKnown RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 SLC28A3Q9HAS3 691 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ZDHHC4Q9NPG8 344 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 IL20Q9NYY1 176 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 H2AFY2Q9P0M6 372 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ZFR2Q9UPR6 939 aaKnown RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 EDDM13A0A1B0GTR0 161 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 RNF13O43567 381 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 LANCL1O43813 399 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 RGS9O75916 674 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 FGF19O95750 216 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 PAHP00439 452 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 HIST1H1TP22492 207 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 IFNA8P32881 189 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 P2RX3P56373 397 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ARPC4P59998 168 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 PRR5P85299 388 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 CDK3Q00526 305 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 PRDX1Q06830 199 aaKnown RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 DBPQ10586 325 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 MRPL28Q13084 256 aaKnown RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 GPR176Q14439 515 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ELAVL3Q14576 367 aaKnown RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 TMEM44Q2T9K0 475 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 C6orf132Q5T0Z8 1188 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ADAMTSL4Q6UY14 1074 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 C16orf62Q7Z3J2 963 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 NUP43Q8NFH3 380 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 OR9A2Q8NGT5 310 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ZFPM2Q8WW38 1151 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 CREB3L1Q96BA8 519 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 MS4A6EQ96DS6 147 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 TBX5Q99593 518 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 OSGEPL1Q9H4B0 414 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 TBX21Q9UL17 535 aa12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 SIRT4Q9Y6E7 314 aaPredicted RBP12.38□□□□□ -0.43
SLC28A1-201ENST00000286749 ZC3H12DA2A288 527 aaKnown RBP12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 SLC9A3R1O14745 358 aaPredicted RBP12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 EMC8O43402 210 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 FCMRO60667 390 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 ZIC2O95409 532 aaPredicted RBP12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 CEBPBP17676 345 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 CERS1P27544 350 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 DECR1Q16698 335 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 PRAMEF8Q5VWM4 474 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 PRAMEF7Q5VXH5 474 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 SMARCD3Q6STE5 483 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 GDF7Q7Z4P5 450 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 DNAJC5GQ8N7S2 189 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 OR2A1Q8NGT9 310 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 NR4A3Q92570 626 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 KAT2AQ92830 837 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 NACC2Q96BF6 587 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 SAMD8Q96LT4 415 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 C12orf66Q96MD2 445 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 MCHR1Q99705 422 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 PRDM7Q9NQW5 492 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 MUC22E2RYF6 1773 aaPredicted RBP12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 A0A1B0GVC2 190 aa12.37□□□□□ -0.43
SLC28A1-201ENST00000286749 A6NIN4 97 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms