RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SPATA5L1Q9BVQ7 753 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 DEFB126Q9BYW3 111 aa17.47■□□□□ 0.39
PDLIM3-202ENST00000284770 CDC14CA4D256 554 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 TMEM200CA6NKL6 621 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 SUV39H1O43463 412 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 HOXB6P17509 224 aaKnown RBP17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 RFX3P48380 749 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 CLN3Q13286 438 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 VTCN1Q7Z7D3 282 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 VASH2Q86V25 355 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 ARMC8Q8IUR7 673 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 ZNF619Q8N2I2 560 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 SEMA6AQ9H2E6 1030 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 LIN28AQ9H9Z2 209 aaKnown RBP17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 WDR70Q9NW82 654 aa17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 MRTO4Q9UKD2 239 aaKnown RBP17.46■□□□□ 0.39
PDLIM3-202ENST00000284770 KIAA0513O60268 411 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 CELA2AP08217 269 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 ATP6V1C1P21283 382 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 MAGEA2P43356 314 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 ID4P47928 161 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 ATP1A4Q13733 1029 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 GPR68Q15743 365 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 ATP6AP1Q15904 470 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 THAP3Q8WTV1 239 aaPredicted RBP17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 RASSF5Q8WWW0 418 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 LZICQ8WZA0 190 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 TMBIM1Q969X1 311 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 HSH2DQ96JZ2 352 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 LMF1Q96S06 567 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 TACO1Q9BSH4 297 aaKnown RBP17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 DOHHQ9BU89 302 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 QRSL1Q9H0R6 528 aaKnown RBP17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 MYOTQ9UBF9 498 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 SEC14L3Q9UDX4 400 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 IL33O95760 270 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 PSMD4P55036 377 aaKnown RBP17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 FLYWCH1Q4VC44 716 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 ZAR1Q86SH2 424 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 SMYD1Q8NB12 490 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 SPPL2AQ8TCT8 520 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 FGF11Q92914 225 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 CENPNQ96H22 339 aaPredicted RBP17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 TPD52L3Q96J77 140 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 YY1AP1Q9H869 796 aa17.45■□□□□ 0.38
PDLIM3-202ENST00000284770 MASP2O00187 686 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 PEX1O43933 1283 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 ALPPP05187 535 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 ABCD3P28288 659 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 NRG3P56975 720 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 KCNJ10P78508 379 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 Q0VFX4 171 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 DUSP7Q16829 419 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 LRRC36Q1X8D7 754 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 TCTN3Q6NUS6 607 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 KBTBD2Q8IY47 623 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 PEX5LQ8IYB4 626 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 TAGAPQ8N103 731 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 SLC34A3Q8N130 599 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 DIO2Q92813 273 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 RSPO3Q9BXY4 272 aaPredicted RBP17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 IL1RAPQ9NPH3 570 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 IFT52Q9Y366 437 aa17.44■□□□□ 0.38
PDLIM3-202ENST00000284770 AGAP5A6NIR3 686 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 WWP2O00308 870 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 PRSS23O95084 383 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 PABPC4LP0CB38 370 aaKnown RBP17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 CD247P20963 164 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 RPS4Y1P22090 263 aaKnown RBP17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 PLCXD2Q0VAA5 305 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 C16orf47Q6ZP98 133 aaPredicted RBP17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 FKBP9P1Q75LS8 142 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 HMGN2P46Q86SG4 172 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 OR52P1PQ8NH57 321 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 EFHD2Q96C19 240 aaPredicted RBP17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 KLHL4Q9C0H6 718 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 KCNE5Q9UJ90 142 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 BAG5Q9UL15 447 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 PCDHGA10Q9Y5H3 936 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 PCSK5Q92824 1860 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 CLOCKO15516 846 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 REM1O75628 298 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 UGT2B17O75795 530 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 LDLRP01130 860 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 SERPINA7P05543 415 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 ITGAMP11215 1152 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 KRT20P35900 424 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 KCNJ5P48544 419 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 SRSF6Q13247 344 aaKnown RBP17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 ZNF311Q5JNZ3 666 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 PRR22Q8IZ63 422 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 OMA1Q96E52 524 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 C7orf34Q96L11 122 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 TRIM45Q9H8W5 580 aaPredicted RBP17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 NTN4Q9HB63 628 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 CACYBPQ9HB71 228 aaKnown RBP17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 ZNF232Q9UNY5 417 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 NPFFR2Q9Y5X5 522 aa17.43■□□□□ 0.38
PDLIM3-202ENST00000284770 TSPAN2O60636 221 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms