RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 SLC1A3P43003 542 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 EXOSC2Q13868 293 aaKnown RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 CLVS2Q5SYC1 327 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 MTFR2Q6P444 385 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 GPR135Q8IZ08 494 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 RASGEF1AQ8N9B8 481 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 OR6T1Q8NGN1 323 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 SPRYD4Q8WW59 207 aaPredicted RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 RIT1Q92963 219 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 ZNF354BQ96LW1 612 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 QRSL1Q9H0R6 528 aaKnown RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 MCCC2Q9HCC0 563 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 IMP3Q9NV31 184 aaKnown RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 GDE1Q9NZC3 331 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 MBTPS2O43462 519 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 TOXO94900 526 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 HRGP04196 525 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 FCARP24071 287 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 CLCNKAP51800 687 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 OR10A3P58181 314 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 BTN1A1Q13410 526 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 LGALSLQ3ZCW2 172 aaPredicted RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 TMEM107Q6UX40 140 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 Q6ZNB5 142 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 C6orf120Q7Z4R8 191 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 GPAT4Q86UL3 456 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 KLBQ86Z14 1044 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 LINC00518Q8N0U6 118 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 LRRC17Q8N6Y2 441 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 TMEM159Q96B96 161 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 AP2M1Q96CW1 435 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 TREX2Q9BQ50 279 aaPredicted RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 THAP7Q9BT49 309 aaPredicted RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 RIOK2Q9BVS4 552 aaKnown RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 PPA2Q9H2U2 334 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 PIGUQ9H490 435 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 FGF20Q9NP95 211 aaPredicted RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 PRDM6Q9NQX0 595 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 ENAMQ9NRM1 1142 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 SIRT4Q9Y6E7 314 aaPredicted RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 PRODHO43272 600 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 SLC2A10O95528 541 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 CATP04040 527 aaKnown RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 HK1P19367 917 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 MAP2K6P52564 334 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 MANFP55145 182 aaKnown RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 CRYZQ08257 329 aaKnown RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 ZNF77Q15935 545 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 EOGTQ5NDL2 527 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 IL17RCQ8NAC3 791 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 PLA2G15Q8NCC3 412 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 KLK6Q92876 244 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 ECHDC3Q96DC8 303 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 IL17FQ96PD4 163 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 TEFMQ96QE5 360 aaKnown RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 FERD3LQ96RJ6 166 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 YIPF4Q9BSR8 244 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 FNDC11Q9BVV2 318 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 GHITMQ9H3K2 345 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 ISG20L2Q9H9L3 353 aaKnown RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 ZNF304Q9HCX3 659 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 ZNF624Q9P2J8 865 aaPredicted RBP10.64□□□□□ -0.71
SCLT1-201ENST00000281142 ING4Q9UNL4 249 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 PRKAB1Q9Y478 270 aa10.64□□□□□ -0.71
SCLT1-201ENST00000281142 TRIOO75962 3097 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 TPOP07202 933 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 LAMP2P13473 410 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 ZNF81P51508 661 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 VSX2P58304 361 aaPredicted RBP10.63□□□□□ -0.71
SCLT1-201ENST00000281142 RAB40BQ12829 278 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 IKZF1Q13422 519 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 SLC30A6Q6NXT4 461 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 Q6ZVU0 165 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 HTR3DQ70Z44 454 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 GPALPP1Q8IXQ4 340 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 MORN4Q8NDC4 146 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 XAGE5Q8WWM1 108 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 SMARCD2Q92925 531 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 EXOSC8Q96B26 276 aaKnown RBP10.63□□□□□ -0.71
SCLT1-201ENST00000281142 SECISBP2Q96T21 854 aaKnown RBP10.63□□□□□ -0.71
SCLT1-201ENST00000281142 ACAD8Q9UKU7 415 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 PLAGL1Q9UM63 463 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 ZC3H12DA2A288 527 aaKnown RBP10.63□□□□□ -0.71
SCLT1-201ENST00000281142 PI15O43692 258 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 CBX5P45973 191 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 CCR6P51684 374 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 ATP12AP54707 1039 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 DCDC1P59894 354 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 TFF2Q03403 129 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 CNTN1Q12860 1018 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 FZD5Q13467 585 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 SMAD4Q13485 552 aaKnown RBP10.63□□□□□ -0.71
SCLT1-201ENST00000281142 NTRK2Q16620 822 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 METAP1DQ6UB28 335 aaPredicted RBP10.63□□□□□ -0.71
SCLT1-201ENST00000281142 SLC36A4Q6YBV0 504 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 CFAP77Q6ZQR2 320 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 PRICKLE2Q7Z3G6 844 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 OR52H1Q8NGJ2 320 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 OTULINQ96BN8 352 aa10.63□□□□□ -0.71
SCLT1-201ENST00000281142 NEURL3Q96EH8 262 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms