RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SOX30O94993 753 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 OR5F1O95221 314 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 CDK1P06493 297 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 CD1CP29017 333 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 HSD17B7P56937 341 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 SNRPGP62308 76 aaKnown RBP15.45■□□□□ 0.06
CCDC40-201ENST00000269318 HSD11B2P80365 405 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 FIGNL1Q6PIW4 674 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 SLC16A12Q6ZSM3 486 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 PTCHD4Q6ZW05 846 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 PLXDC1Q8IUK5 500 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 VSTM2LQ96N03 204 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 GPN2Q9H9Y4 310 aaPredicted RBP15.45■□□□□ 0.06
CCDC40-201ENST00000269318 FOLH1BQ9HBA9 442 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 SPTBP11277 2137 aa15.45■□□□□ 0.06
CCDC40-201ENST00000269318 MN1Q10571 1320 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-201ENST00000269318 NPIPA5A0A0B4J1W7 369 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 A0A1W2PPW3 197 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 SH3D21A4FU49 640 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 NPIPA7E9PJI5 369 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 HYAL3O43820 417 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-201ENST00000269318 MAN1A2O60476 641 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 KCNK2O95069 426 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 NTN1O95631 604 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 GUSBP08236 651 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 NPIPA8P0DM63 369 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 MYF5P13349 255 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 MAOAP21397 527 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 C21orf33P30042 268 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-201ENST00000269318 SSTR4P31391 388 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 STT3AP46977 705 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 GPLD1P80108 840 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 LYSMD4Q5XG99 296 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 CCDC81Q6ZN84 652 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 PLEKHM3Q6ZWE6 761 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 GDF7Q7Z4P5 450 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 ZAR1Q86SH2 424 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 ANKRD13BQ86YJ7 626 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 MYDGFQ969H8 173 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 DGAT2Q96PD7 388 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 GPR83Q9NYM4 423 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 WARS2Q9UGM6 360 aaKnown RBP15.44■□□□□ 0.06
CCDC40-201ENST00000269318 ENPP5Q9UJA9 477 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 HEMK1Q9Y5R4 338 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-201ENST00000269318 CDHR4A6H8M9 788 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 NOL3O60936 208 aaKnown RBP15.44■□□□□ 0.06
CCDC40-201ENST00000269318 OR2B3O76000 313 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 TDGF1P13385 188 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 TNNI3P19429 210 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 GSTM3P21266 225 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 IFNA8P32881 189 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 GCGRP47871 477 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 SEPHS1P49903 392 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 PLAURQ03405 335 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 DECR1Q16698 335 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 AMZ1Q400G9 498 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 TMEM201Q5SNT2 666 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 MRPL2Q5T653 305 aaKnown RBP15.44■□□□□ 0.06
CCDC40-201ENST00000269318 UBE2UQ5VVX9 321 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 PRICKLE2Q7Z3G6 844 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 KIF18BQ86Y91 864 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 NKAIN4Q8IVV8 208 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 D2HGDHQ8N465 521 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 ACOT11Q8WXI4 607 aaPredicted RBP15.44■□□□□ 0.06
CCDC40-201ENST00000269318 YIPF6Q96EC8 236 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 SLC41A3Q96GZ6 507 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 DCUN1D5Q9BTE7 237 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 CUTCQ9NTM9 273 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 SELENONQ9NZV5 590 aa15.44■□□□□ 0.06
CCDC40-201ENST00000269318 PDGFBP01127 241 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-201ENST00000269318 CCNA2P20248 432 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 IFNGR2P38484 337 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 OMPP47874 163 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 ARRB1P49407 418 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-201ENST00000269318 TBCEQ15813 527 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-201ENST00000269318 ZNF730Q6ZMV8 503 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 Q8N9G6 341 aaPredicted RBP15.43■□□□□ 0.06
CCDC40-201ENST00000269318 TOR1AIP2Q8NFQ8 470 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 GNPDA2Q8TDQ7 276 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 TRUB1Q8WWH5 349 aaKnown RBP15.43■□□□□ 0.06
CCDC40-201ENST00000269318 SLC41A2Q96JW4 573 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 NECTIN3Q9NQS3 549 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 LANCL2Q9NS86 450 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 CLN6Q9NWW5 311 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 DTX4Q9Y2E6 619 aa15.43■□□□□ 0.06
CCDC40-201ENST00000269318 TMEM150CB9EJG8 249 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 IGKV1D-16P01601 117 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 LCKP06239 509 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 PRG2P13727 222 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 HTR2AP28223 471 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 SLC15A1P46059 708 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 DHPSP49366 369 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 CDK5Q00535 292 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 FUT7Q11130 342 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 NFATC3Q12968 1075 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 TSPAN31Q12999 210 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 ZNF267Q14586 743 aaPredicted RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 PMS2CLQ68D20 193 aa15.42■□□□□ 0.06
CCDC40-201ENST00000269318 ZC3H14Q6PJT7 736 aaKnown RBP15.42■□□□□ 0.06
CCDC40-201ENST00000269318 MED25Q71SY5 747 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms